RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 SNX1Q13596 522 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 C2CD5Q86YS7 1000 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 H0YC42 278 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 CFAP36Q96G28 342 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 CARD6Q9BX69 1037 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 PCDHB4Q9Y5E5 795 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 DYNLT1P63172 113 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 KLHL30Q0D2K2 578 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 TEKT1Q969V4 418 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 FBXL5Q9UKA1 691 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 DUOX2Q9NRD8 1548 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 POLR2BP30876 1174 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 LIG3P49916 1009 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 TMEM87BQ96K49 555 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 RPS6KB1P23443 525 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 SKOR1P84550 965 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 FLOT2Q14254 428 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 SF3B3Q15393 1217 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 ZSCAN26Q16670 478 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 CEP85Q6P2H3 762 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 SPATS2LQ9NUQ6 558 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 EVI5O60447 810 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 MYL1P05976 194 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 KRT80Q6KB66 452 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 ELMSAN1Q6PJG2 1045 aa17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-258ENST00000638029 ZSCAN9O15535 394 aaPredicted RBP17.77■□□□□ 0.43
CACNA1A-258ENST00000638029 FBXL13Q8NEE6 735 aa17.77■□□□□ 0.43
CACNA1A-258ENST00000638029 BCAP29Q9UHQ4 241 aa17.77■□□□□ 0.43
CACNA1A-258ENST00000638029 ANGEL1Q9UNK9 670 aaKnown RBP17.77■□□□□ 0.43
CACNA1A-258ENST00000638029 KIF1BO60333 1816 aa17.77■□□□□ 0.43
CACNA1A-258ENST00000638029 KCNK3O14649 394 aa17.77■□□□□ 0.43
CACNA1A-258ENST00000638029 CDV3Q9UKY7 258 aaKnown RBP17.77■□□□□ 0.43
CACNA1A-258ENST00000638029 IRX4P78413 519 aa17.77■□□□□ 0.43
CACNA1A-258ENST00000638029 PTK2BQ14289 1009 aa17.77■□□□□ 0.43
CACNA1A-258ENST00000638029 C17orf53Q8N3J3 647 aaPredicted RBP17.77■□□□□ 0.43
CACNA1A-258ENST00000638029 GOLGA8FQ08AF8 430 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 GOLGA8DPQ0D2H9 430 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 RFX6Q8HWS3 928 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 HADHQ16836 314 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 FRA10AC1Q70Z53 315 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 NPATQ14207 1427 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 WDR91A4D1P6 747 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 RNF139Q8WU17 664 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 NELFBQ8WX92 580 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 KCNH3Q9ULD8 1083 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 NDUFB9Q9Y6M9 179 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 SOS1Q07889 1333 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 COBLO75128 1261 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 TECP42680 631 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 RPS6KA1Q15418 735 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 SYCE1Q8N0S2 351 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 BBS5Q8N3I7 341 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 DNAJC8O75937 253 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 B4GALNT2Q8NHY0 566 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 TEKT4Q8WW24 435 aa17.76■□□□□ 0.43
CACNA1A-258ENST00000638029 GPC4O75487 556 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 SFMBT2Q5VUG0 894 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 PDZD4Q76G19 769 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 FLT4P35916 1363 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 INO80B-WBP1J3KQ70 363 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 TAGAPQ8N103 731 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 INO80BQ9C086 356 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 Q9H521 79 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 RIMS2Q9UQ26 1411 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 PDE8AO60658 829 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 YAF2Q8IY57 180 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 IWS1Q96ST2 819 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 SLF1Q9BQI6 1058 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 SAMSN1Q9NSI8 373 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 KDM5AP29375 1690 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 ASPHQ12797 758 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 YTHDC2Q9H6S0 1430 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 RNMTO43148 476 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 NCF2P19878 526 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 GARSP41250 739 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 PIK3R5Q8WYR1 880 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 SARS2Q9NP81 518 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 EPS15L1Q9UBC2 864 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 AFF4Q9UHB7 1163 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 CFLARO15519 480 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 YWHAGP61981 247 aaKnown RBP eCLIP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 SNX21Q969T3 373 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 CAPN11Q9UMQ6 739 aa17.75■□□□□ 0.43
CACNA1A-258ENST00000638029 DIAPH2O60879 1101 aa17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 CTNNA1P35221 906 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 SNCBQ16143 134 aa17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 KIF19Q2TAC6 998 aa17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 GLE1Q53GS7 698 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 TTC38Q5R3I4 469 aa17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 F5H423 210 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 LONP1P36776 959 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 HMGXB3Q12766 1538 aa17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 PRPF4O43172 522 aaKnown RBP eCLIP17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 GPAA1O43292 621 aa17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 SERPIND1P05546 499 aa17.74■□□□□ 0.43
CACNA1A-258ENST00000638029 VMP1Q96GC9 406 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms