RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 TBC1D8O95759 1140 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 C8BP07358 591 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 ACRP10323 421 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 L1CAMP32004 1257 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 SLC9A5Q14940 896 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 SURF1Q15526 300 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 CWF19L2Q2TBE0 894 aaKnown RBP2.82□□□□□ -1.96
SCN1A-215ENST00000637285 CDCP2Q5VXM1 449 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 TMEM192Q8IY95 271 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 IGDCC4Q8TDY8 1250 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 CHFRQ96EP1 664 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 PEX11GQ96HA9 241 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 LCORQ96JN0 433 aaPredicted RBP2.82□□□□□ -1.96
SCN1A-215ENST00000637285 RHOVQ96L33 236 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 TMEM74Q96NL1 305 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 PTCHD1Q96NR3 888 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 CNNM2Q9H8M5 875 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 NUDT5Q9UKK9 219 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 RWDD3Q9Y3V2 267 aa2.82□□□□□ -1.96
SCN1A-215ENST00000637285 WDR33Q9C0J8 1336 aaKnown RBP2.82□□□□□ -1.96
SCN1A-215ENST00000637285 B4GALT3O60512 393 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 CCNFP41002 786 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 NOP2P46087 812 aaKnown RBP2.81□□□□□ -1.96
SCN1A-215ENST00000637285 SELENOPP49908 381 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 ST13P50502 369 aaKnown RBP2.81□□□□□ -1.96
SCN1A-215ENST00000637285 TRIM26Q12899 539 aaPredicted RBP2.81□□□□□ -1.96
SCN1A-215ENST00000637285 NOL9Q5SY16 702 aaKnown RBP2.81□□□□□ -1.96
SCN1A-215ENST00000637285 NLRC3Q7RTR2 1065 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 PLEKHH3Q7Z736 793 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 CCDC144CPQ8IYA2 1237 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 C7orf61Q8IZ16 206 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 LZTR1Q8N653 840 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 KYQ8NBH2 561 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 NLGN2Q8NFZ4 835 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 USP33Q8TEY7 942 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 BRF1Q92994 677 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 PRR13Q9NZ81 148 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 FBLN5Q9UBX5 448 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 SIT1Q9Y3P8 196 aa2.81□□□□□ -1.96
SCN1A-215ENST00000637285 ZNF623O75123 536 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 ZBTB7AO95365 584 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 CYP1A1P04798 512 aaPredicted RBP2.8□□□□□ -1.96
SCN1A-215ENST00000637285 CD3EP07766 207 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 IFNGR1P15260 489 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 NANOS3P60323 173 aaKnown RBP2.8□□□□□ -1.96
SCN1A-215ENST00000637285 PDE4CQ08493 712 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 PSMD2Q13200 908 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 R3HDM1Q15032 1099 aaKnown RBP2.8□□□□□ -1.96
SCN1A-215ENST00000637285 PRAMEF18Q5VWM3 479 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 CD300LDQ6UXZ3 194 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 FAM196AQ6ZSG2 479 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 FAM26EQ8N5C1 309 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 TTLL6Q8N841 843 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 DNERQ8NFT8 737 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 WWC2-AS2Q96NR7 200 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 FCRL3Q96P31 734 aaPredicted RBP2.8□□□□□ -1.96
SCN1A-215ENST00000637285 CEP89Q96ST8 783 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 PTPN18Q99952 460 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 SRRTQ9BXP5 876 aaKnown RBP2.8□□□□□ -1.96
SCN1A-215ENST00000637285 IKZF4Q9H2S9 585 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 TNFRSF18Q9Y5U5 241 aa2.8□□□□□ -1.96
SCN1A-215ENST00000637285 USP31Q70CQ4 1352 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 C9IYK1 514 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 ATE1O95260 518 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 CTSHP09668 335 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 NME1P15531 152 aaKnown RBP2.79□□□□□ -1.96
SCN1A-215ENST00000637285 PPP2CBP62714 309 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 PPP2CAP67775 309 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 ABHD18Q0P651 414 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 PWP1Q13610 501 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 TDRD10Q5VZ19 366 aaKnown RBP2.79□□□□□ -1.96
SCN1A-215ENST00000637285 IGFL4Q6B9Z1 124 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 GK5Q6ZS86 529 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 ARHGEF18Q6ZSZ5 1173 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 NETO2Q8NC67 525 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 RSRP1Q9BUV0 290 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 CSRNP2Q9H175 543 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 PCDH18Q9HCL0 1135 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 GULP1Q9UBP9 304 aa2.79□□□□□ -1.96
SCN1A-215ENST00000637285 SHOXO15266 292 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 PPP1R11O60927 126 aaPredicted RBP2.78□□□□□ -1.96
SCN1A-215ENST00000637285 PPFIA2O75334 1257 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 ZNF202O95125 648 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 NTRK1P04629 796 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 GARTP22102 1010 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 ITGA1P56199 1179 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 ZNF445P59923 1031 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 CLCQ05315 142 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 HNRNPA0Q13151 305 aaKnown RBP2.78□□□□□ -1.96
SCN1A-215ENST00000637285 FOXE3Q13461 319 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 NRN1LQ496H8 165 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 DCAF15Q66K64 600 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 WWC2Q6AWC2 1192 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 ETV3LQ6ZN32 361 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 DNAJC10Q8IXB1 793 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 FIBCD1Q8N539 461 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 NAF1Q96HR8 494 aaKnown RBP2.78□□□□□ -1.96
SCN1A-215ENST00000637285 DHRS1Q96LJ7 313 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 ZDHHC15Q96MV8 337 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 SLC9A7Q96T83 725 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms