RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 SUSD4Q5VX71 490 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 ZBTB33Q86T24 672 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 DZIP3Q86Y13 1208 aaKnown RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 SMYD4Q8IYR2 804 aaPredicted RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 ENAHQ8N8S7 591 aaPredicted RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 MARCH10Q8NA82 808 aaPredicted RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 MIGA1Q8NAN2 632 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 TSEN2Q8NCE0 465 aaKnown RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 MSANTD4Q8NCY6 345 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 GIPC2Q8TF65 315 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 ZNF516Q92618 1163 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 CCDC51Q96ER9 411 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 MTRQ99707 1265 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 TUT1Q9H6E5 874 aaKnown RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 LZTFL1Q9NQ48 299 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 DNAAF2Q9NVR5 837 aaKnown RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 LIMA1Q9UHB6 759 aaKnown RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 TNKSO95271 1327 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 XDHP47989 1333 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 MYH6P13533 1939 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 RTL9Q8NET4 1388 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 DUOX1Q9NRD9 1551 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 H3BQF6 201 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 RNF225M0QZC1 329 aaPredicted RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 PRDM1O75626 825 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 PLEKHA8P1O95397 391 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 BMP15O95972 392 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 FGRP09769 529 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 CASP14P31944 242 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 ARHGAP25P42331 645 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 MMP16P51512 607 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 ERVK-24P63145 666 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 ATP2C1P98194 919 aaPredicted RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 TROAPQ12815 778 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 TUBB2AQ13885 445 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 DDB1Q16531 1140 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 KLHL10Q6JEL2 608 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 PPFIBP1Q86W92 1011 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 MSL3Q8N5Y2 521 aaKnown RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 CCDC34Q96HJ3 373 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 CTAGE1Q96RT6 745 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 RIOK1Q9BRS2 568 aaKnown RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 UBAC1Q9BSL1 405 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 TUBB2BQ9BVA1 445 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 TOMM22Q9NS69 142 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 TSR3Q9UJK0 312 aaKnown RBP7.04□□□□□ -1.28
GABRA1-213ENST00000636340 DOLKQ9UPQ8 538 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 COL4A1P02462 1669 aa7.04□□□□□ -1.28
GABRA1-213ENST00000636340 DLEC1Q9Y238 1755 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 CICQ96RK0 1608 aaPredicted RBP7.03□□□□□ -1.28
GABRA1-213ENST00000636340 RBM47A0AV96 593 aaKnown RBP7.03□□□□□ -1.28
GABRA1-213ENST00000636340 ANKRD33BA6NCL7 494 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 KIF5CO60282 957 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 CYP7A1P22680 504 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 SCTRP47872 440 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 MARSP56192 900 aaKnown RBP7.03□□□□□ -1.28
GABRA1-213ENST00000636340 GTF2IP78347 998 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 KRT31Q15323 416 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 IL17AQ16552 155 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 MUM1L1Q5H9M0 696 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 CEP112Q8N8E3 955 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 NEK11Q8NG66 645 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 SDR42E1Q8WUS8 393 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 CPLX3Q8WVH0 158 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 ESR2Q92731 530 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 ZSCAN10Q96SZ4 725 aaPredicted RBP7.03□□□□□ -1.28
GABRA1-213ENST00000636340 PNKPQ96T60 521 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 PSD3Q9NYI0 1048 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 V9GY48 417 aaPredicted RBP7.03□□□□□ -1.28
GABRA1-213ENST00000636340 ZNF804BA4D1E1 1349 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 CACNA1SQ13698 1873 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 COL1A1P02452 1464 aaPredicted RBP7.03□□□□□ -1.28
GABRA1-213ENST00000636340 THSD7AQ9UPZ6 1657 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 hCG_1642624A0A1W2PR95 340 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 EXOC5O00471 708 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 ADAMTS3O15072 1205 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 EIF5P55010 431 aaKnown RBP7.03□□□□□ -1.28
GABRA1-213ENST00000636340 AMPD2Q01433 879 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 ZNF174Q15697 407 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 ERFEQ4G0M1 354 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 ZNF569Q5MCW4 686 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 TTC38Q5R3I4 469 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 CNGA4Q8IV77 575 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 SLC35F6Q8N357 371 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 TXLNBQ8N3L3 684 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 ACRBPQ8NEB7 543 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 BAP1Q92560 729 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 ZSWIM4Q9H7M6 989 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 TMEM51Q9NW97 253 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 PUF60Q9UHX1 559 aaKnown RBP7.03□□□□□ -1.28
GABRA1-213ENST00000636340 RWDD2AQ9UIY3 292 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 L1RE1Q9UN81 338 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 TTF2Q9UNY4 1162 aaKnown RBP7.03□□□□□ -1.28
GABRA1-213ENST00000636340 CTNND2Q9UQB3 1225 aa7.03□□□□□ -1.28
GABRA1-213ENST00000636340 MINDY4BA8MYZ0 360 aa7.02□□□□□ -1.29
GABRA1-213ENST00000636340 TK2O00142 265 aa7.02□□□□□ -1.29
GABRA1-213ENST00000636340 KCNQ2O43526 872 aa7.02□□□□□ -1.29
GABRA1-213ENST00000636340 TFRCP02786 760 aaKnown RBP7.02□□□□□ -1.29
GABRA1-213ENST00000636340 CAPN2P17655 700 aa7.02□□□□□ -1.29
GABRA1-213ENST00000636340 XBP1P17861 261 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms