RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ANKS1AQ92625 1134 aa21.71■■□□□ 1.07
CLN6-212ENST00000636020 TANC1Q9C0D5 1861 aa21.71■■□□□ 1.07
CLN6-212ENST00000636020 CHGBP05060 677 aa21.7■■□□□ 1.06
CLN6-212ENST00000636020 NFRKBQ6P4R8 1299 aa21.7■■□□□ 1.06
CLN6-212ENST00000636020 HFE2Q6ZVN8 426 aa21.7■■□□□ 1.06
CLN6-212ENST00000636020 RPAP2Q8IXW5 612 aaPredicted RBP21.7■■□□□ 1.06
CLN6-212ENST00000636020 NEK9Q8TD19 979 aa21.7■■□□□ 1.06
CLN6-212ENST00000636020 PPP1R13LQ8WUF5 828 aa21.7■■□□□ 1.06
CLN6-212ENST00000636020 TRERF1Q96PN7 1200 aa21.7■■□□□ 1.06
CLN6-212ENST00000636020 PHOX2BQ99453 314 aa21.7■■□□□ 1.06
CLN6-212ENST00000636020 MKNK2Q9HBH9 465 aa21.7■■□□□ 1.06
CLN6-212ENST00000636020 ARPP21Q9UBL0 812 aaPredicted RBP21.7■■□□□ 1.06
CLN6-212ENST00000636020 C5orf42Q9H799 3197 aa21.69■■□□□ 1.06
CLN6-212ENST00000636020 LINC01553A4QN01 128 aa21.69■■□□□ 1.06
CLN6-212ENST00000636020 CPT1AP50416 773 aa21.69■■□□□ 1.06
CLN6-212ENST00000636020 DEFB103AP81534 67 aa21.69■■□□□ 1.06
CLN6-212ENST00000636020 GPNMBQ14956 572 aa21.69■■□□□ 1.06
CLN6-212ENST00000636020 LRRFIP1Q32MZ4 808 aaKnown RBP21.69■■□□□ 1.06
CLN6-212ENST00000636020 GMCL1P1Q8NEA9 526 aa21.69■■□□□ 1.06
CLN6-212ENST00000636020 RAD9AQ99638 391 aa21.69■■□□□ 1.06
CLN6-212ENST00000636020 GPHNQ9NQX3 736 aaPredicted RBP21.69■■□□□ 1.06
CLN6-212ENST00000636020 PAG1Q9NWQ8 432 aa21.69■■□□□ 1.06
CLN6-212ENST00000636020 CYP39A1Q9NYL5 469 aa21.69■■□□□ 1.06
CLN6-212ENST00000636020 SYNPO2Q9UMS6 1093 aa21.69■■□□□ 1.06
CLN6-212ENST00000636020 MYH4Q9Y623 1939 aa21.68■■□□□ 1.06
CLN6-212ENST00000636020 BMP3P12645 472 aa21.68■■□□□ 1.06
CLN6-212ENST00000636020 PTPN11Q06124 597 aaPredicted RBP21.68■■□□□ 1.06
CLN6-212ENST00000636020 UBE3CQ15386 1083 aa21.68■■□□□ 1.06
CLN6-212ENST00000636020 SBK1Q52WX2 424 aa21.68■■□□□ 1.06
CLN6-212ENST00000636020 STK11IPQ8N1F8 1099 aa21.68■■□□□ 1.06
CLN6-212ENST00000636020 RHPN1Q8TCX5 695 aa21.68■■□□□ 1.06
CLN6-212ENST00000636020 WDR11Q9BZH6 1224 aa21.68■■□□□ 1.06
CLN6-212ENST00000636020 TRIP12Q14669 1992 aaPredicted RBP21.67■■□□□ 1.06
CLN6-212ENST00000636020 TMEM232C9JQI7 657 aa21.67■■□□□ 1.06
CLN6-212ENST00000636020 GJB5O95377 273 aa21.67■■□□□ 1.06
CLN6-212ENST00000636020 ALAS1P13196 640 aa21.67■■□□□ 1.06
CLN6-212ENST00000636020 ZP2Q05996 745 aa21.67■■□□□ 1.06
CLN6-212ENST00000636020 MUM1L1Q5H9M0 696 aa21.67■■□□□ 1.06
CLN6-212ENST00000636020 SLFN13Q68D06 897 aa21.67■■□□□ 1.06
CLN6-212ENST00000636020 CEP85Q6P2H3 762 aa21.67■■□□□ 1.06
CLN6-212ENST00000636020 MFSD14AQ96MC6 490 aa21.67■■□□□ 1.06
CLN6-212ENST00000636020 PURBQ96QR8 312 aaKnown RBP21.67■■□□□ 1.06
CLN6-212ENST00000636020 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.67■■□□□ 1.06
CLN6-212ENST00000636020 MTMR4Q9NYA4 1195 aa21.67■■□□□ 1.06
CLN6-212ENST00000636020 RBM47A0AV96 593 aaKnown RBP21.66■■□□□ 1.06
CLN6-212ENST00000636020 C19orf67A6NJJ6 358 aa21.66■■□□□ 1.06
CLN6-212ENST00000636020 H3BQ06 376 aaPredicted RBP21.66■■□□□ 1.06
CLN6-212ENST00000636020 ZKSCAN2Q63HK3 967 aa21.66■■□□□ 1.06
CLN6-212ENST00000636020 LRRC47Q8N1G4 583 aaKnown RBP21.66■■□□□ 1.06
CLN6-212ENST00000636020 CEP95Q96GE4 821 aa21.66■■□□□ 1.06
CLN6-212ENST00000636020 PRKAG3Q9UGI9 489 aa21.66■■□□□ 1.06
CLN6-212ENST00000636020 SIP14410 1827 aa21.65■■□□□ 1.06
CLN6-212ENST00000636020 ST18O60284 1047 aa21.65■■□□□ 1.06
CLN6-212ENST00000636020 STAT2P52630 851 aa21.65■■□□□ 1.06
CLN6-212ENST00000636020 FAM160B2Q86V87 743 aa21.65■■□□□ 1.06
CLN6-212ENST00000636020 CLASRPQ8N2M8 674 aaKnown RBP21.65■■□□□ 1.06
CLN6-212ENST00000636020 OR6J1Q8NGC5 347 aa21.65■■□□□ 1.06
CLN6-212ENST00000636020 AFAP1L1Q8TED9 768 aa21.65■■□□□ 1.06
CLN6-212ENST00000636020 CHURC1Q8WUH1 139 aa21.65■■□□□ 1.06
CLN6-212ENST00000636020 PUS7LQ9H0K6 701 aaKnown RBP21.65■■□□□ 1.06
CLN6-212ENST00000636020 NOD1Q9Y239 953 aa21.65■■□□□ 1.06
CLN6-212ENST00000636020 KPNA6O60684 536 aa21.64■■□□□ 1.05
CLN6-212ENST00000636020 TTLL1O95922 423 aa21.64■■□□□ 1.05
CLN6-212ENST00000636020 TCTN1Q2MV58 587 aa21.64■■□□□ 1.05
CLN6-212ENST00000636020 HSP90AB4PQ58FF6 505 aa21.64■■□□□ 1.05
CLN6-212ENST00000636020 CNKSR3Q6P9H4 555 aa21.64■■□□□ 1.05
CLN6-212ENST00000636020 CAGE1Q8TC20 777 aa21.64■■□□□ 1.05
CLN6-212ENST00000636020 STAG1Q8WVM7 1258 aa21.64■■□□□ 1.05
CLN6-212ENST00000636020 MRPL38Q96DV4 380 aaKnown RBP21.64■■□□□ 1.05
CLN6-212ENST00000636020 BOLA2Q9H3K6 86 aa21.64■■□□□ 1.05
CLN6-212ENST00000636020 LCTP09848 1927 aa21.64■■□□□ 1.05
CLN6-212ENST00000636020 ABHD14A-ACY1A0A1B0GW23 586 aa21.63■■□□□ 1.05
CLN6-212ENST00000636020 CXCL10P02778 98 aa21.63■■□□□ 1.05
CLN6-212ENST00000636020 IFIT2P09913 472 aaKnown RBP21.63■■□□□ 1.05
CLN6-212ENST00000636020 BRDTQ58F21 947 aaPredicted RBP21.63■■□□□ 1.05
CLN6-212ENST00000636020 NSMFQ6X4W1 530 aa21.63■■□□□ 1.05
CLN6-212ENST00000636020 CCDC155Q8N6L0 562 aa21.63■■□□□ 1.05
CLN6-212ENST00000636020 FBXO22Q8NEZ5 403 aa21.63■■□□□ 1.05
CLN6-212ENST00000636020 CTAGE1Q96RT6 745 aa21.63■■□□□ 1.05
CLN6-212ENST00000636020 FAM50BQ9Y247 325 aa21.63■■□□□ 1.05
CLN6-212ENST00000636020 A6NJR5 290 aa21.62■■□□□ 1.05
CLN6-212ENST00000636020 MINDY4BA8MYZ0 360 aa21.62■■□□□ 1.05
CLN6-212ENST00000636020 PTGISQ16647 500 aa21.62■■□□□ 1.05
CLN6-212ENST00000636020 ADHFE1Q8IWW8 467 aa21.62■■□□□ 1.05
CLN6-212ENST00000636020 ZNF444Q8N0Y2 327 aaPredicted RBP21.62■■□□□ 1.05
CLN6-212ENST00000636020 PRSS33Q8NF86 280 aa21.62■■□□□ 1.05
CLN6-212ENST00000636020 PABPC5Q96DU9 382 aaKnown RBP21.62■■□□□ 1.05
CLN6-212ENST00000636020 GMCL1Q96IK5 515 aa21.62■■□□□ 1.05
CLN6-212ENST00000636020 STRBPQ96SI9 672 aaKnown RBP21.62■■□□□ 1.05
CLN6-212ENST00000636020 C17orf80Q9BSJ5 609 aa21.62■■□□□ 1.05
CLN6-212ENST00000636020 UPF3BQ9BZI7 483 aaKnown RBP21.62■■□□□ 1.05
CLN6-212ENST00000636020 CTNNA3Q9UI47 895 aa21.62■■□□□ 1.05
CLN6-212ENST00000636020 ZNF316A6NFI3 1004 aaPredicted RBP21.61■■□□□ 1.05
CLN6-212ENST00000636020 GSG1L2A8MUP6 293 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 PLA2G6O60733 806 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 PARNO95453 639 aaKnown RBP21.61■■□□□ 1.05
CLN6-212ENST00000636020 SELPP16109 830 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 ATP5JP18859 108 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 ALDH5A1P51649 535 aaPredicted RBP21.61■■□□□ 1.05
CLN6-212ENST00000636020 SNAP25P60880 206 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms