RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 IFIT3O14879 490 aaKnown RBP18.17■□□□□ 0.5
LINC00339-209ENST00000635450 ALDH5A1P51649 535 aaPredicted RBP18.17■□□□□ 0.5
LINC00339-209ENST00000635450 TNFAIP2Q03169 654 aa18.17■□□□□ 0.5
LINC00339-209ENST00000635450 FAAP100Q0VG06 881 aa18.17■□□□□ 0.5
LINC00339-209ENST00000635450 NECTIN1Q15223 517 aa18.17■□□□□ 0.5
LINC00339-209ENST00000635450 GPATCH4Q5T3I0 446 aaKnown RBP18.17■□□□□ 0.5
LINC00339-209ENST00000635450 CREB3L3Q68CJ9 461 aa18.17■□□□□ 0.5
LINC00339-209ENST00000635450 TLK2Q86UE8 772 aa18.17■□□□□ 0.5
LINC00339-209ENST00000635450 DEFB123Q8N688 67 aa18.17■□□□□ 0.5
LINC00339-209ENST00000635450 KIAA1217Q5T5P2 1943 aa18.17■□□□□ 0.5
LINC00339-209ENST00000635450 PTPDC1A2A3K4 754 aa18.16■□□□□ 0.5
LINC00339-209ENST00000635450 CALML3P27482 149 aa18.16■□□□□ 0.5
LINC00339-209ENST00000635450 USH1GQ495M9 461 aa18.16■□□□□ 0.5
LINC00339-209ENST00000635450 GNASQ5JWF2 1037 aa18.16■□□□□ 0.5
LINC00339-209ENST00000635450 STOX1Q6ZVD7 989 aa18.16■□□□□ 0.5
LINC00339-209ENST00000635450 ANKRD33Q7Z3H0 272 aa18.16■□□□□ 0.5
LINC00339-209ENST00000635450 MORC4Q8TE76 937 aa18.16■□□□□ 0.5
LINC00339-209ENST00000635450 EYSQ5T1H1 3165 aa18.15■□□□□ 0.5
LINC00339-209ENST00000635450 KIAA0355O15063 1070 aa18.15■□□□□ 0.5
LINC00339-209ENST00000635450 WTAPQ15007 396 aa18.15■□□□□ 0.5
LINC00339-209ENST00000635450 SEC23AQ15436 765 aa18.15■□□□□ 0.5
LINC00339-209ENST00000635450 ASPRV1Q53RT3 343 aa18.15■□□□□ 0.5
LINC00339-209ENST00000635450 CXCL17Q6UXB2 119 aa18.15■□□□□ 0.5
LINC00339-209ENST00000635450 NOL8Q76FK4 1167 aaKnown RBP18.15■□□□□ 0.5
LINC00339-209ENST00000635450 TBX21Q9UL17 535 aa18.15■□□□□ 0.5
LINC00339-209ENST00000635450 WDR19Q8NEZ3 1342 aa18.15■□□□□ 0.5
LINC00339-209ENST00000635450 GBF1Q92538 1859 aa18.14■□□□□ 0.49
LINC00339-209ENST00000635450 PARP1P09874 1014 aaKnown RBP18.14■□□□□ 0.49
LINC00339-209ENST00000635450 MCM5P33992 734 aa18.14■□□□□ 0.49
LINC00339-209ENST00000635450 RPS6P62753 249 aaKnown RBP18.14■□□□□ 0.49
LINC00339-209ENST00000635450 NKX3-2P78367 333 aa18.14■□□□□ 0.49
LINC00339-209ENST00000635450 CDC37Q16543 378 aaPredicted RBP18.14■□□□□ 0.49
LINC00339-209ENST00000635450 TMEM67Q5HYA8 995 aa18.14■□□□□ 0.49
LINC00339-209ENST00000635450 CHST3Q7LGC8 479 aa18.14■□□□□ 0.49
LINC00339-209ENST00000635450 MB21D2Q8IYB1 491 aaPredicted RBP18.14■□□□□ 0.49
LINC00339-209ENST00000635450 PCSK9Q8NBP7 692 aaKnown RBP18.14■□□□□ 0.49
LINC00339-209ENST00000635450 NUP133Q8WUM0 1156 aa18.14■□□□□ 0.49
LINC00339-209ENST00000635450 GLT1D1Q96MS3 346 aa18.14■□□□□ 0.49
LINC00339-209ENST00000635450 SENP2Q9HC62 589 aa18.14■□□□□ 0.49
LINC00339-209ENST00000635450 TMEM39AQ9NV64 488 aa18.14■□□□□ 0.49
LINC00339-209ENST00000635450 MTMR10Q9NXD2 777 aa18.14■□□□□ 0.49
LINC00339-209ENST00000635450 SCN10AQ9Y5Y9 1956 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 REC8O95072 547 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 CDK7P50613 346 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 FSCN1Q16658 493 aaKnown RBP18.13■□□□□ 0.49
LINC00339-209ENST00000635450 GPR153Q6NV75 609 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 RNF207Q6ZRF8 634 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 ADGRF4Q8IZF3 695 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 STAG2Q8N3U4 1231 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 TBC1D5Q92609 795 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 SPC25Q9HBM1 224 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 VTA1Q9NP79 307 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 COL20A1Q9P218 1284 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 PNMA2Q9UL42 364 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 GRIN2DO15399 1336 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 ELP1O95163 1332 aa18.13■□□□□ 0.49
LINC00339-209ENST00000635450 A0A0U1RQG5 324 aaPredicted RBP18.12■□□□□ 0.49
LINC00339-209ENST00000635450 DYNC1LI2O43237 492 aaPredicted RBP18.12■□□□□ 0.49
LINC00339-209ENST00000635450 RAG1P15918 1043 aa18.12■□□□□ 0.49
LINC00339-209ENST00000635450 PSMC6P62333 389 aa18.12■□□□□ 0.49
LINC00339-209ENST00000635450 SLC35G1Q2M3R5 365 aa18.12■□□□□ 0.49
LINC00339-209ENST00000635450 FAM126BQ8IXS8 530 aa18.12■□□□□ 0.49
LINC00339-209ENST00000635450 VTI1AQ96AJ9 217 aa18.12■□□□□ 0.49
LINC00339-209ENST00000635450 FAM161BQ96MY7 647 aa18.12■□□□□ 0.49
LINC00339-209ENST00000635450 TOX2Q96NM4 488 aa18.12■□□□□ 0.49
LINC00339-209ENST00000635450 MTA3Q9BTC8 594 aa18.12■□□□□ 0.49
LINC00339-209ENST00000635450 SCN5AQ14524 2016 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 DCDC2CA8MYV0 355 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 ARVCFO00192 962 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 PRC1O43663 620 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 DHX16O60231 1041 aaKnown RBP18.11■□□□□ 0.49
LINC00339-209ENST00000635450 EDNRBP24530 442 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 ANTXR2P58335 489 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 COL9A3Q14050 684 aaPredicted RBP18.11■□□□□ 0.49
LINC00339-209ENST00000635450 KRT32Q14532 448 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 QRICH1Q2TAL8 776 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 CATIPQ7Z7H3 387 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 TMEM87BQ96K49 555 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 GUCD1Q96NT3 240 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 NEK1Q96PY6 1258 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 JMJD4Q9H9V9 463 aa18.11■□□□□ 0.49
LINC00339-209ENST00000635450 ADD3Q9UEY8 706 aaKnown RBP18.11■□□□□ 0.49
LINC00339-209ENST00000635450 UMODL1Q5DID0 1318 aa18.1■□□□□ 0.49
LINC00339-209ENST00000635450 TMTC2Q8N394 836 aa18.1■□□□□ 0.49
LINC00339-209ENST00000635450 IGDCC4Q8TDY8 1250 aa18.1■□□□□ 0.49
LINC00339-209ENST00000635450 PPP1R13LQ8WUF5 828 aa18.1■□□□□ 0.49
LINC00339-209ENST00000635450 COPS5Q92905 334 aa18.1■□□□□ 0.49
LINC00339-209ENST00000635450 PPP1R12CQ9BZL4 782 aa18.1■□□□□ 0.49
LINC00339-209ENST00000635450 MYH7BA7E2Y1 1941 aa18.1■□□□□ 0.49
LINC00339-209ENST00000635450 TANC1Q9C0D5 1861 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 UNC80Q8N2C7 3258 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 OPLAHO14841 1288 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 PPP1R11O60927 126 aaPredicted RBP18.09■□□□□ 0.49
LINC00339-209ENST00000635450 ARIH2O95376 493 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 FPGSQ05932 587 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 TSGA10IPQ3SY00 556 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 DUSP28Q4G0W2 176 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 IQSEC1Q6DN90 963 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 NFXL1Q6ZNB6 911 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 SLC43A3Q8NBI5 491 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms