RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 CAGE1Q8TC20 777 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 C7orf25Q9BPX7 421 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 SPZ1Q9BXG8 430 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 LEMD3Q9Y2U8 911 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 BTDP43251 543 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 CDK8P49336 464 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 CKAP4Q07065 602 aaKnown RBP11.95□□□□□ -0.5
PSPC1-207ENST00000635251 CCDC170Q8IYT3 715 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 TBCKQ8TEA7 893 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 GPR101Q96P66 508 aaPredicted RBP11.95□□□□□ -0.5
PSPC1-207ENST00000635251 MMS19Q96T76 1030 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 BIN2Q9UBW5 565 aaPredicted RBP11.95□□□□□ -0.5
PSPC1-207ENST00000635251 RTCBQ9Y3I0 505 aaKnown RBP11.95□□□□□ -0.5
PSPC1-207ENST00000635251 IRS2Q9Y4H2 1338 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 EIF3CLB5ME19 914 aaKnown RBP11.95□□□□□ -0.5
PSPC1-207ENST00000635251 N4BP1O75113 896 aaKnown RBP11.95□□□□□ -0.5
PSPC1-207ENST00000635251 TXKP42681 527 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 TNNT3P45378 269 aaPredicted RBP11.95□□□□□ -0.5
PSPC1-207ENST00000635251 PPP4CP60510 307 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 WDR93Q6P2C0 686 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 SLC51AQ86UW1 340 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 EIF3CQ99613 913 aaKnown RBP11.95□□□□□ -0.5
PSPC1-207ENST00000635251 SLC39A2Q9NP94 309 aa11.95□□□□□ -0.5
PSPC1-207ENST00000635251 MACROD2A1Z1Q3 448 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 MCM3P25205 808 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 USP14P54578 494 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 GRAPQ13588 217 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 SPA17Q15506 151 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 MAP9Q49MG5 647 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
PSPC1-207ENST00000635251 PAPD7Q5XG87 772 aaKnown RBP11.94□□□□□ -0.5
PSPC1-207ENST00000635251 SV2BQ7L1I2 683 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 TEX11Q8IYF3 940 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 GRAPLQ8TC17 118 aaPredicted RBP11.94□□□□□ -0.5
PSPC1-207ENST00000635251 HPS3Q969F9 1004 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 CDK5RAP3Q96JB5 506 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 PIGSQ96S52 555 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 TTYH3Q9C0H2 523 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 JADE2Q9NQC1 790 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 PSD3Q9NYI0 1048 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 FAN1Q9Y2M0 1017 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 RASSF10A6NK89 507 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 IDEP14735 1019 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 CYP27A1Q02318 531 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 KIF5AQ12840 1032 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 NFIXQ14938 502 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 ZSCAN26Q16670 478 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 PTF1AQ7RTS3 328 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 REXO1Q8N1G1 1221 aaKnown RBP11.94□□□□□ -0.5
PSPC1-207ENST00000635251 MSL3Q8N5Y2 521 aaKnown RBP11.94□□□□□ -0.5
PSPC1-207ENST00000635251 CCDC42Q96M95 316 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 TRERF1Q96PN7 1200 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 RTFDC1Q9BY42 306 aaPredicted RBP11.94□□□□□ -0.5
PSPC1-207ENST00000635251 LACRTQ9GZZ8 138 aa11.94□□□□□ -0.5
PSPC1-207ENST00000635251 RCCD1A6NED2 376 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 PHACTR2O75167 634 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 CCDC96Q2M329 555 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 MIIPQ5JXC2 388 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 LEKR1Q6ZMV7 388 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 ZNF662Q6ZS27 426 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 C16orf86Q6ZW13 317 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 NEDD1Q8NHV4 660 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 FAM71BQ8TC56 605 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 FBXO41Q8TF61 875 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 ARHGEF1Q92888 912 aaKnown RBP11.93□□□□□ -0.5
PSPC1-207ENST00000635251 SECISBP2LQ93073 1101 aaKnown RBP11.93□□□□□ -0.5
PSPC1-207ENST00000635251 RPGRIP1Q96KN7 1286 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 TSGA10Q9BZW7 698 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 UBA5Q9GZZ9 404 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 TMEM260Q9NX78 707 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 LRWD1Q9UFC0 647 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 NAV1Q8NEY1 1877 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 A0A0U1RQG5 324 aaPredicted RBP11.93□□□□□ -0.5
PSPC1-207ENST00000635251 A0A1W2PQJ5 194 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 LRRIQ3A6PVS8 624 aaPredicted RBP11.93□□□□□ -0.5
PSPC1-207ENST00000635251 USO1O60763 962 aaKnown RBP11.93□□□□□ -0.5
PSPC1-207ENST00000635251 VAV2P52735 878 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 CALCRLQ16602 461 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 TMEM266Q2M3C6 531 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 DYMQ7RTS9 669 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 CERS3Q8IU89 383 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 KIAA0895Q8NCT3 520 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 CEP95Q96GE4 821 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 ERGIC2Q96RQ1 377 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 MMTAG2Q9BU76 263 aaKnown RBP11.93□□□□□ -0.5
PSPC1-207ENST00000635251 DEF6Q9H4E7 631 aa11.93□□□□□ -0.5
PSPC1-207ENST00000635251 CWC15Q9P013 229 aaKnown RBP11.93□□□□□ -0.5
PSPC1-207ENST00000635251 CCNL1Q9UK58 526 aaPredicted RBP11.93□□□□□ -0.5
PSPC1-207ENST00000635251 ANO9A1A5B4 782 aa11.92□□□□□ -0.5
PSPC1-207ENST00000635251 CAPN2P17655 700 aa11.92□□□□□ -0.5
PSPC1-207ENST00000635251 BRD2P25440 801 aaKnown RBP11.92□□□□□ -0.5
PSPC1-207ENST00000635251 FIGNQ5HY92 759 aa11.92□□□□□ -0.5
PSPC1-207ENST00000635251 IQCEQ6IPM2 695 aa11.92□□□□□ -0.5
PSPC1-207ENST00000635251 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
PSPC1-207ENST00000635251 ZSCAN29Q8IWY8 852 aaPredicted RBP11.92□□□□□ -0.5
PSPC1-207ENST00000635251 GOLGA5Q8TBA6 731 aa11.92□□□□□ -0.5
PSPC1-207ENST00000635251 SEMA6BQ9H3T3 888 aa11.92□□□□□ -0.5
PSPC1-207ENST00000635251 DUSP10Q9Y6W6 482 aa11.92□□□□□ -0.5
PSPC1-207ENST00000635251 ZNF831Q5JPB2 1677 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms