RNA–Protein interactions for RNA: ENST00000634403.1

SMARCA2-222, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 2

Gene SMARCA2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-222	ENST00000634403	COL14A1	Q05707	1796 aa	Known RBP	6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	C5	P01031	1676 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	AOX1	Q06278	1338 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	KRBA1	A5PL33	1030 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	NBPF7	P0C2Y1	421 aa	Predicted RBP	6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ZNF165	P49910	485 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PDE1A	P54750	535 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	CLC	Q05315	142 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	HSP90AB4P	Q58FF6	505 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	CCDC81	Q6ZN84	652 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PPP1R42	Q7Z4L9	355 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	OTUD7A	Q8TE49	926 aa	Predicted RBP	6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	DRC1	Q96MC2	740 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	CEP41	Q9BYV8	373 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ATXN3L	Q9H3M9	355 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PPP1R1B	Q9UD71	204 aa	Predicted RBP	6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	USP16	Q9Y5T5	823 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ACTL7B	Q9Y614	415 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SHANK3	Q9BYB0	1731 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GLI3	P10071	1580 aa		6.61	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SART1	O43290	800 aa	Known RBP	6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	IGSF3	O75054	1194 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	HTR3B	O95264	441 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SDS	P20132	328 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GRK4	P32298	578 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	CHRNA4	P43681	627 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	RING1	Q06587	406 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	TTLL4	Q14679	1199 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ZBTB37	Q5TC79	503 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	TXNRD3	Q86VQ6	643 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	REXO1	Q8N1G1	1221 aa	Known RBP	6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	XAGE3	Q8WTP9	111 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	FERD3L	Q96RJ6	166 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	UBL7	Q96S82	380 aa	Predicted RBP	6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	METTL22	Q9BUU2	404 aa	Predicted RBP	6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GSX1	Q9H4S2	264 aa	Predicted RBP	6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	FAM105A	Q9NUU6	356 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	C9orf78	Q9NZ63	289 aa	Predicted RBP	6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	EXOC6B	Q9Y2D4	811 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	TACC3	Q9Y6A5	838 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ROBO1	Q9Y6N7	1651 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PAPPA	Q13219	1627 aa		6.6	□□□□□ -1.35
SMARCA2-222	ENST00000634403	DISP2	A7MBM2	1401 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	TNS2	Q63HR2	1409 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	LAMB4	A4D0S4	1761 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	UBR2	Q8IWV8	1755 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	COL15A1	P39059	1388 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GRM8	O00222	908 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SRGAP3	O43295	1099 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GAS2	O43903	313 aa	Known RBP	6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SSB	P05455	408 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	IGKV5-2	P06315	115 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	HCLS1	P14317	486 aa	Predicted RBP	6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PLCG1	P19174	1290 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ATP2B1	P20020	1258 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	RAB6A	P20340	208 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	NTF4	P34130	210 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ASPA	P45381	313 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ETF1	P62495	437 aa	Known RBP	6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PDE4B	Q07343	736 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	NEXN	Q0ZGT2	675 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	FBXW10	Q5XX13	1052 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	COPS6	Q7L5N1	327 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	CD163	Q86VB7	1156 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	RNF214	Q8ND24	703 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	CPLX3	Q8WVH0	158 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SNX21	Q969T3	373 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	KIF1BP	Q96EK5	621 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	MEGF10	Q96KG7	1140 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SRRT	Q9BXP5	876 aa	Known RBP	6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	WNT10A	Q9GZT5	417 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	EHMT1	Q9H9B1	1298 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PIDD1	Q9HB75	910 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	BTG4	Q9NY30	223 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	STRIP2	Q9ULQ0	834 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ZNRF3	Q9ULT6	936 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	KCP	Q6ZWJ8	1503 aa		6.59	□□□□□ -1.35
SMARCA2-222	ENST00000634403	COL16A1	Q07092	1604 aa	Predicted RBP	6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	USP42	Q9H9J4	1324 aa	Known RBP	6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	C1QTNF9B	B2RNN3	333 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	FANCG	O15287	622 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	RNGTT	O60942	597 aa	Known RBP	6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	SURF6	O75683	361 aa	Known RBP	6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	ATE1	O95260	518 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	PGR	P06401	933 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	MYL6B	P14649	208 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	MX1	P20591	662 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	AIMP1	Q12904	312 aa	Known RBP	6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	GCKR	Q14397	625 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	CASC1	Q6TDU7	716 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	UBE3D	Q7Z6J8	389 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	PLBD2	Q8NHP8	589 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	DHX38	Q92620	1227 aa	Known RBP	6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	ISL2	Q96A47	359 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	KAZALD1	Q96I82	304 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	FAM46A	Q96IP4	442 aa	Known RBP	6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	TEX13A	Q9BXU3	409 aa	Predicted RBP	6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	REV1	Q9UBZ9	1251 aa		6.58	□□□□□ -1.36
SMARCA2-222	ENST00000634403	MRVI1	Q9Y6F6	885 aa		6.58	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms