RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 COL11A1P12107 1806 aaPredicted RBP16.92■□□□□ 0.3
LIMS4-203ENST00000632758 GCOM1H8Y6P7 765 aaPredicted RBP16.92■□□□□ 0.3
LIMS4-203ENST00000632758 TLR2O60603 784 aa16.92■□□□□ 0.3
LIMS4-203ENST00000632758 POLR2MP0CAP2 368 aa16.92■□□□□ 0.3
LIMS4-203ENST00000632758 BCRP11274 1271 aa16.92■□□□□ 0.3
LIMS4-203ENST00000632758 C17orf99Q6UX52 265 aa16.92■□□□□ 0.3
LIMS4-203ENST00000632758 NSMFQ6X4W1 530 aa16.92■□□□□ 0.3
LIMS4-203ENST00000632758 MCF2L2Q86YR7 1114 aa16.92■□□□□ 0.3
LIMS4-203ENST00000632758 CHST13Q8NET6 341 aa16.92■□□□□ 0.3
LIMS4-203ENST00000632758 ACAD9Q9H845 621 aa16.92■□□□□ 0.3
LIMS4-203ENST00000632758 EFCC1Q9HA90 598 aa16.92■□□□□ 0.3
LIMS4-203ENST00000632758 A0A0G2JMZ2 1700 aa16.92■□□□□ 0.3
LIMS4-203ENST00000632758 PIK3CDO00329 1044 aa16.91■□□□□ 0.3
LIMS4-203ENST00000632758 CA12O43570 354 aa16.91■□□□□ 0.3
LIMS4-203ENST00000632758 SLC25A27O95847 323 aa16.91■□□□□ 0.3
LIMS4-203ENST00000632758 HSD17B4P51659 736 aa16.91■□□□□ 0.3
LIMS4-203ENST00000632758 RPS6P62753 249 aaKnown RBP16.91■□□□□ 0.3
LIMS4-203ENST00000632758 BAATQ14032 418 aaPredicted RBP16.91■□□□□ 0.3
LIMS4-203ENST00000632758 FCHSD1Q86WN1 690 aa16.91■□□□□ 0.3
LIMS4-203ENST00000632758 REM2Q8IYK8 340 aaPredicted RBP16.91■□□□□ 0.3
LIMS4-203ENST00000632758 PURBQ96QR8 312 aaKnown RBP16.91■□□□□ 0.3
LIMS4-203ENST00000632758 GLT8D2Q9H1C3 349 aa16.91■□□□□ 0.3
LIMS4-203ENST00000632758 COL20A1Q9P218 1284 aa16.91■□□□□ 0.3
LIMS4-203ENST00000632758 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
LIMS4-203ENST00000632758 FAM110CQ1W6H9 321 aa16.9■□□□□ 0.3
LIMS4-203ENST00000632758 SLC30A10Q6XR72 485 aa16.9■□□□□ 0.3
LIMS4-203ENST00000632758 RNF207Q6ZRF8 634 aa16.9■□□□□ 0.3
LIMS4-203ENST00000632758 BRAPQ7Z569 592 aa16.9■□□□□ 0.3
LIMS4-203ENST00000632758 SYTL5Q8TDW5 730 aaPredicted RBP16.9■□□□□ 0.3
LIMS4-203ENST00000632758 A1CFQ9NQ94 594 aaKnown RBP16.9■□□□□ 0.3
LIMS4-203ENST00000632758 CCDC194A0A1B0GVG4 234 aa16.89■□□□□ 0.3
LIMS4-203ENST00000632758 EDIL3O43854 480 aa16.89■□□□□ 0.3
LIMS4-203ENST00000632758 ALDH1A1P00352 501 aa16.89■□□□□ 0.3
LIMS4-203ENST00000632758 ATP2B1P20020 1258 aa16.89■□□□□ 0.3
LIMS4-203ENST00000632758 TOB1P50616 345 aaPredicted RBP16.89■□□□□ 0.3
LIMS4-203ENST00000632758 GHRHRQ02643 423 aa16.89■□□□□ 0.3
LIMS4-203ENST00000632758 DNM1Q05193 864 aaKnown RBP16.89■□□□□ 0.3
LIMS4-203ENST00000632758 INF2Q27J81 1249 aa16.89■□□□□ 0.3
LIMS4-203ENST00000632758 WDR78Q5VTH9 848 aa16.89■□□□□ 0.3
LIMS4-203ENST00000632758 MYSM1Q5VVJ2 828 aa16.89■□□□□ 0.3
LIMS4-203ENST00000632758 KRT25Q7Z3Z0 450 aa16.89■□□□□ 0.3
LIMS4-203ENST00000632758 TFIP11Q9UBB9 837 aaKnown RBP16.89■□□□□ 0.3
LIMS4-203ENST00000632758 WNT7AO00755 349 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 TBC1D8O95759 1140 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 CCNA1P78396 465 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 NBR1Q14596 966 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 ANKRD35Q8N283 1001 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 SHCBP1Q8NEM2 672 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 TBCKQ8TEA7 893 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 TAAR1Q96RJ0 339 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 ANO3Q9BYT9 981 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 FTOQ9C0B1 505 aaKnown RBP eCLIP16.89■□□□□ 0.29
LIMS4-203ENST00000632758 MROH8Q9H579 483 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 CYP39A1Q9NYL5 469 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 FBXO40Q9UH90 709 aa16.89■□□□□ 0.29
LIMS4-203ENST00000632758 TRPA1O75762 1119 aa16.88■□□□□ 0.29
LIMS4-203ENST00000632758 NONOQ15233 471 aaKnown RBP eCLIP16.88■□□□□ 0.29
LIMS4-203ENST00000632758 SPDYE3A6NKU9 549 aa16.87■□□□□ 0.29
LIMS4-203ENST00000632758 FOSP01100 380 aaPredicted RBP16.87■□□□□ 0.29
LIMS4-203ENST00000632758 COPB2P35606 906 aa16.87■□□□□ 0.29
LIMS4-203ENST00000632758 UBXN2AP68543 259 aa16.87■□□□□ 0.29
LIMS4-203ENST00000632758 AP3B2Q13367 1082 aa16.87■□□□□ 0.29
LIMS4-203ENST00000632758 CCAR1Q8IX12 1150 aaKnown RBP16.87■□□□□ 0.29
LIMS4-203ENST00000632758 SAMD3Q8N6K7 520 aa16.87■□□□□ 0.29
LIMS4-203ENST00000632758 USP28Q96RU2 1077 aa16.87■□□□□ 0.29
LIMS4-203ENST00000632758 MAP3K20Q9NYL2 800 aaKnown RBP16.87■□□□□ 0.29
LIMS4-203ENST00000632758 CNTN2Q02246 1040 aa16.86■□□□□ 0.29
LIMS4-203ENST00000632758 CEBPZQ03701 1054 aaKnown RBP16.86■□□□□ 0.29
LIMS4-203ENST00000632758 MMP19Q99542 508 aa16.86■□□□□ 0.29
LIMS4-203ENST00000632758 PCDHB6Q9Y5E3 794 aa16.86■□□□□ 0.29
LIMS4-203ENST00000632758 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
LIMS4-203ENST00000632758 CLIC4Q9Y696 253 aa16.86■□□□□ 0.29
LIMS4-203ENST00000632758 BAG4O95429 457 aaKnown RBP16.85■□□□□ 0.29
LIMS4-203ENST00000632758 PGK2P07205 417 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 FCER1AP12319 257 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.85■□□□□ 0.29
LIMS4-203ENST00000632758 GPR142Q7Z601 462 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 TEX2Q8IWB9 1127 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 ZFP91Q96JP5 570 aaPredicted RBP16.85■□□□□ 0.29
LIMS4-203ENST00000632758 CNPY2Q9Y2B0 182 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 CTGFP29279 349 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 KCTD2Q14681 263 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 ZNF174Q15697 407 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 RILPL1Q5EBL4 403 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 MCTP2Q6DN12 878 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 NEK8Q86SG6 692 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 CRYGNQ8WXF5 182 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 RMDN3Q96TC7 470 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 GDPD2Q9HCC8 539 aa16.85■□□□□ 0.29
LIMS4-203ENST00000632758 NOL7Q9UMY1 257 aaKnown RBP16.85■□□□□ 0.29
LIMS4-203ENST00000632758 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
LIMS4-203ENST00000632758 SOWAHBA6NEL2 793 aa16.84■□□□□ 0.29
LIMS4-203ENST00000632758 POTEB2H3BUK9 544 aa16.84■□□□□ 0.29
LIMS4-203ENST00000632758 NCLP19338 710 aaKnown RBP16.84■□□□□ 0.29
LIMS4-203ENST00000632758 EIF2AK2P19525 551 aaKnown RBP16.84■□□□□ 0.29
LIMS4-203ENST00000632758 PTPREP23469 700 aa16.84■□□□□ 0.29
LIMS4-203ENST00000632758 MAPK4P31152 587 aa16.84■□□□□ 0.29
LIMS4-203ENST00000632758 SREBF1P36956 1147 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms