RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 FBXO40Q9UH90 709 aa21.6■■□□□ 1.05
PNKP-224ENST00000631020 CTDP1Q9Y5B0 961 aaPredicted RBP21.6■■□□□ 1.05
PNKP-224ENST00000631020 RANBP2P49792 3224 aaKnown RBP21.59■■□□□ 1.05
PNKP-224ENST00000631020 CCDC196A0A1B0GTZ2 297 aa21.59■■□□□ 1.05
PNKP-224ENST00000631020 DHX16O60231 1041 aaKnown RBP21.59■■□□□ 1.05
PNKP-224ENST00000631020 DTNBO60941 627 aa21.59■■□□□ 1.05
PNKP-224ENST00000631020 ZSCAN31Q96LW9 406 aaPredicted RBP21.59■■□□□ 1.05
PNKP-224ENST00000631020 ZNF536O15090 1300 aa21.59■■□□□ 1.05
PNKP-224ENST00000631020 TRIOBPQ9H2D6 2365 aa21.58■■□□□ 1.05
PNKP-224ENST00000631020 CHST13Q8NET6 341 aa21.58■■□□□ 1.04
PNKP-224ENST00000631020 PIBF1Q8WXW3 757 aa21.58■■□□□ 1.04
PNKP-224ENST00000631020 GTF3C6Q969F1 213 aa21.58■■□□□ 1.04
PNKP-224ENST00000631020 PIGSQ96S52 555 aa21.58■■□□□ 1.04
PNKP-224ENST00000631020 TINF2Q9BSI4 451 aa21.58■■□□□ 1.04
PNKP-224ENST00000631020 PRO3102Q9H379 93 aa21.58■■□□□ 1.04
PNKP-224ENST00000631020 RAVER2Q9HCJ3 691 aaKnown RBP21.58■■□□□ 1.04
PNKP-224ENST00000631020 RIPK3Q9Y572 518 aa21.58■■□□□ 1.04
PNKP-224ENST00000631020 DNAJC25-GNG10A0A024R161 153 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 DNM1LO00429 736 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 PPFIA3O75145 1194 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 CTDNEP1O95476 244 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 PGK2P07205 417 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 MCM2P49736 904 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 CDC37Q16543 378 aaPredicted RBP21.57■■□□□ 1.04
PNKP-224ENST00000631020 CCDC174Q6PII3 467 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 CPXCR1Q8N123 301 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 ARRDC4Q8NCT1 418 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 TMX3Q96JJ7 454 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 CNTNAP5Q8WYK1 1306 aa21.57■■□□□ 1.04
PNKP-224ENST00000631020 hCG_1642624A0A1W2PR95 340 aa21.56■■□□□ 1.04
PNKP-224ENST00000631020 IFNAR1P17181 557 aa21.56■■□□□ 1.04
PNKP-224ENST00000631020 QRICH1Q2TAL8 776 aa21.56■■□□□ 1.04
PNKP-224ENST00000631020 CHRDL2Q6WN34 429 aa21.56■■□□□ 1.04
PNKP-224ENST00000631020 AGBL1Q96MI9 1066 aa21.56■■□□□ 1.04
PNKP-224ENST00000631020 SH2B1Q9NRF2 756 aaPredicted RBP21.56■■□□□ 1.04
PNKP-224ENST00000631020 V9GY48 417 aaPredicted RBP21.56■■□□□ 1.04
PNKP-224ENST00000631020 ZBTB5O15062 677 aa21.55■■□□□ 1.04
PNKP-224ENST00000631020 PPP1R11O60927 126 aaPredicted RBP21.55■■□□□ 1.04
PNKP-224ENST00000631020 TAL1P17542 331 aaPredicted RBP21.55■■□□□ 1.04
PNKP-224ENST00000631020 ZNF467Q7Z7K2 595 aaPredicted RBP21.55■■□□□ 1.04
PNKP-224ENST00000631020 HOMER1Q86YM7 354 aa21.55■■□□□ 1.04
PNKP-224ENST00000631020 PHKBQ93100 1093 aa21.55■■□□□ 1.04
PNKP-224ENST00000631020 SNX21Q969T3 373 aa21.55■■□□□ 1.04
PNKP-224ENST00000631020 DDX11Q96FC9 970 aa21.55■■□□□ 1.04
PNKP-224ENST00000631020 SMCHD1A6NHR9 2005 aa21.55■■□□□ 1.04
PNKP-224ENST00000631020 A0A1W2PPC1 479 aa21.55■■□□□ 1.04
PNKP-224ENST00000631020 MAMDC4Q6UXC1 1216 aa21.55■■□□□ 1.04
PNKP-224ENST00000631020 CCDC83Q8IWF9 413 aa21.55■■□□□ 1.04
PNKP-224ENST00000631020 RRP36Q96EU6 259 aaKnown RBP21.55■■□□□ 1.04
PNKP-224ENST00000631020 SYNGAP1Q96PV0 1343 aa21.54■■□□□ 1.04
PNKP-224ENST00000631020 PNMA6FA0A0J9YX94 578 aa21.54■■□□□ 1.04
PNKP-224ENST00000631020 CPLX1O14810 134 aa21.54■■□□□ 1.04
PNKP-224ENST00000631020 ICAM1P05362 532 aa21.54■■□□□ 1.04
PNKP-224ENST00000631020 TKFCQ3LXA3 575 aa21.54■■□□□ 1.04
PNKP-224ENST00000631020 C7orf61Q8IZ16 206 aa21.54■■□□□ 1.04
PNKP-224ENST00000631020 RBM27Q9P2N5 1060 aaKnown RBP21.54■■□□□ 1.04
PNKP-224ENST00000631020 SLC4A3P48751 1232 aa21.53■■□□□ 1.04
PNKP-224ENST00000631020 FXR1P51114 621 aaKnown RBP eCLIP21.53■■□□□ 1.04
PNKP-224ENST00000631020 PRAMEF19Q5SWL8 479 aa21.53■■□□□ 1.04
PNKP-224ENST00000631020 DNAH12Q6ZR08 3092 aa21.52■■□□□ 1.04
PNKP-224ENST00000631020 PRPF3O43395 683 aaKnown RBP21.52■■□□□ 1.04
PNKP-224ENST00000631020 PKN1Q16512 942 aa21.52■■□□□ 1.04
PNKP-224ENST00000631020 FBXO11Q86XK2 927 aa21.52■■□□□ 1.04
PNKP-224ENST00000631020 SLC26A6Q9BXS9 759 aa21.52■■□□□ 1.04
PNKP-224ENST00000631020 CCPG1Q9ULG6 757 aa21.52■■□□□ 1.04
PNKP-224ENST00000631020 CNPY2Q9Y2B0 182 aa21.52■■□□□ 1.04
PNKP-224ENST00000631020 KBTBD13C9JR72 458 aa21.51■■□□□ 1.03
PNKP-224ENST00000631020 ZNF865P0CJ78 1059 aaPredicted RBP21.51■■□□□ 1.03
PNKP-224ENST00000631020 ANKRD35Q8N283 1001 aa21.51■■□□□ 1.03
PNKP-224ENST00000631020 NSUN7Q8NE18 718 aaKnown RBP21.51■■□□□ 1.03
PNKP-224ENST00000631020 RNF26Q9BY78 433 aaPredicted RBP21.51■■□□□ 1.03
PNKP-224ENST00000631020 SENP6Q9GZR1 1112 aaPredicted RBP21.51■■□□□ 1.03
PNKP-224ENST00000631020 ACAD9Q9H845 621 aa21.51■■□□□ 1.03
PNKP-224ENST00000631020 JAK2O60674 1132 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 RARBP10826 455 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 AKR1A1P14550 325 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 BMP8BP34820 402 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 SSRP1Q08945 709 aaKnown RBP21.5■■□□□ 1.03
PNKP-224ENST00000631020 LRRC26Q2I0M4 334 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 USH1GQ495M9 461 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 CPLX2Q6PUV4 134 aaKnown RBP21.5■■□□□ 1.03
PNKP-224ENST00000631020 AMNQ9BXJ7 453 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 SEC63Q9UGP8 760 aaKnown RBP21.5■■□□□ 1.03
PNKP-224ENST00000631020 K7ELQ4 463 aaPredicted RBP21.5■■□□□ 1.03
PNKP-224ENST00000631020 ALAS1P13196 640 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 FDPSP14324 419 aaKnown RBP21.5■■□□□ 1.03
PNKP-224ENST00000631020 MUM1L1Q5H9M0 696 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 GDF15Q99988 308 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 HOMER2Q9NSB8 354 aa21.5■■□□□ 1.03
PNKP-224ENST00000631020 CDKL5O76039 1030 aa21.49■■□□□ 1.03
PNKP-224ENST00000631020 SNAI1O95863 264 aaPredicted RBP21.49■■□□□ 1.03
PNKP-224ENST00000631020 CUL4AQ13619 759 aa21.49■■□□□ 1.03
PNKP-224ENST00000631020 PFKFB3Q16875 520 aaPredicted RBP21.49■■□□□ 1.03
PNKP-224ENST00000631020 GJC2Q5T442 439 aaPredicted RBP21.49■■□□□ 1.03
PNKP-224ENST00000631020 CLEC4DQ8WXI8 215 aa21.49■■□□□ 1.03
PNKP-224ENST00000631020 GPKOWQ92917 476 aaPredicted RBP eCLIP21.49■■□□□ 1.03
PNKP-224ENST00000631020 TRERF1Q96PN7 1200 aa21.49■■□□□ 1.03
PNKP-224ENST00000631020 RNF146Q9NTX7 359 aa21.49■■□□□ 1.03
PNKP-224ENST00000631020 PNMA2Q9UL42 364 aa21.49■■□□□ 1.03
PNKP-224ENST00000631020 PCDHA1Q9Y5I3 950 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms