RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 MUTYHQ9UIF7 546 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 ISY1Q9ULR0 285 aaKnown RBP14.29□□□□□ -0.12
CHD2-218ENST00000629346 NOD1Q9Y239 953 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 PTPRSQ13332 1948 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 TET1Q8NFU7 2136 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 GOLIM4O00461 696 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 GFRA3O60609 400 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 RARSP54136 660 aaKnown RBP14.28□□□□□ -0.12
CHD2-218ENST00000629346 OAZ1P54368 228 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 FOXK2Q01167 660 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 FBXO22Q8NEZ5 403 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 CHMP4CQ96CF2 233 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 PURBQ96QR8 312 aaKnown RBP14.28□□□□□ -0.12
CHD2-218ENST00000629346 C17orf80Q9BSJ5 609 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 ZFHX2Q9C0A1 2572 aaPredicted RBP14.28□□□□□ -0.12
CHD2-218ENST00000629346 FAM86C1Q9NVL1 165 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 NYAP2Q9P242 653 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 PRKAG3Q9UGI9 489 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 BAZ2AQ9UIF9 1905 aaKnown RBP14.28□□□□□ -0.12
CHD2-218ENST00000629346 FEM1BQ9UK73 627 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 FAM50BQ9Y247 325 aa14.28□□□□□ -0.12
CHD2-218ENST00000629346 GJB5O95377 273 aa14.27□□□□□ -0.13
CHD2-218ENST00000629346 ALAS1P13196 640 aa14.27□□□□□ -0.13
CHD2-218ENST00000629346 CPT1AP50416 773 aa14.27□□□□□ -0.13
CHD2-218ENST00000629346 ADHFE1Q8IWW8 467 aa14.27□□□□□ -0.13
CHD2-218ENST00000629346 FRAT1Q92837 279 aaPredicted RBP14.27□□□□□ -0.13
CHD2-218ENST00000629346 DDRGK1Q96HY6 314 aa14.27□□□□□ -0.13
CHD2-218ENST00000629346 BCL11AQ9H165 835 aa14.27□□□□□ -0.13
CHD2-218ENST00000629346 NOP58Q9Y2X3 529 aaKnown RBP14.27□□□□□ -0.13
CHD2-218ENST00000629346 ZDBF2Q9HCK1 2354 aa14.26□□□□□ -0.13
CHD2-218ENST00000629346 TRIM27P14373 513 aa14.26□□□□□ -0.13
CHD2-218ENST00000629346 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHD2-218ENST00000629346 TCTN1Q2MV58 587 aa14.26□□□□□ -0.13
CHD2-218ENST00000629346 DUSP28Q4G0W2 176 aa14.26□□□□□ -0.13
CHD2-218ENST00000629346 NFRKBQ6P4R8 1299 aa14.26□□□□□ -0.13
CHD2-218ENST00000629346 CTR9Q6PD62 1173 aa14.26□□□□□ -0.13
CHD2-218ENST00000629346 OR6J1Q8NGC5 347 aa14.26□□□□□ -0.13
CHD2-218ENST00000629346 MRPL38Q96DV4 380 aaKnown RBP14.26□□□□□ -0.13
CHD2-218ENST00000629346 TRERF1Q96PN7 1200 aa14.26□□□□□ -0.13
CHD2-218ENST00000629346 WDR11Q9BZH6 1224 aa14.26□□□□□ -0.13
CHD2-218ENST00000629346 VTA1Q9NP79 307 aa14.26□□□□□ -0.13
CHD2-218ENST00000629346 C5orf42Q9H799 3197 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 TMEM232C9JQI7 657 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 RASA1P20936 1047 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 SNAP25P60880 206 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 GPNMBQ14956 572 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 CLUL1Q15846 466 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 CNKSR3Q6P9H4 555 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 BANK1Q8NDB2 785 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 PBXIP1Q96AQ6 731 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 PABPC5Q96DU9 382 aaKnown RBP14.25□□□□□ -0.13
CHD2-218ENST00000629346 MKNK2Q9HBH9 465 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 CLDND1Q9NY35 253 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 CTNNA3Q9UI47 895 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 SLC4A4Q9Y6R1 1079 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 TANC1Q9C0D5 1861 aa14.25□□□□□ -0.13
CHD2-218ENST00000629346 IPO8O15397 1037 aaKnown RBP14.24□□□□□ -0.13
CHD2-218ENST00000629346 CHGBP05060 677 aa14.24□□□□□ -0.13
CHD2-218ENST00000629346 TCF15Q12870 199 aa14.24□□□□□ -0.13
CHD2-218ENST00000629346 IKQ13123 557 aaPredicted RBP14.24□□□□□ -0.13
CHD2-218ENST00000629346 PTGISQ16647 500 aa14.24□□□□□ -0.13
CHD2-218ENST00000629346 PTPROQ16827 1216 aa14.24□□□□□ -0.13
CHD2-218ENST00000629346 LRRFIP1Q32MZ4 808 aaKnown RBP14.24□□□□□ -0.13
CHD2-218ENST00000629346 TCEAL5Q5H9L2 206 aa14.24□□□□□ -0.13
CHD2-218ENST00000629346 MUM1L1Q5H9M0 696 aa14.24□□□□□ -0.13
CHD2-218ENST00000629346 NSMFQ6X4W1 530 aa14.24□□□□□ -0.13
CHD2-218ENST00000629346 RNF135Q8IUD6 432 aa14.24□□□□□ -0.13
CHD2-218ENST00000629346 LRRC47Q8N1G4 583 aaKnown RBP14.24□□□□□ -0.13
CHD2-218ENST00000629346 IL1RAPL2Q9NP60 686 aa14.24□□□□□ -0.13
CHD2-218ENST00000629346 SIP14410 1827 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 SPTBN4Q9H254 2564 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 BMP3P12645 472 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 SELPP16109 830 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 TIGD5Q53EQ6 642 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 BRDTQ58F21 947 aaPredicted RBP14.23□□□□□ -0.13
CHD2-218ENST00000629346 HERC4Q5GLZ8 1057 aaPredicted RBP14.23□□□□□ -0.13
CHD2-218ENST00000629346 SLFN13Q68D06 897 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 LRRC8DQ7L1W4 858 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 SUGP1Q8IWZ8 645 aaKnown RBP14.23□□□□□ -0.13
CHD2-218ENST00000629346 TMEM57Q8N5G2 664 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 CCDC155Q8N6L0 562 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 AFAP1L1Q8TED9 768 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 EDAQ92838 391 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 CYP39A1Q9NYL5 469 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 EXOC6BQ9Y2D4 811 aa14.23□□□□□ -0.13
CHD2-218ENST00000629346 ABHD14A-ACY1A0A1B0GW23 586 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 TMEM221A6NGB7 291 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 M0R296 226 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 NBNO60934 754 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 ADD2P35612 726 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 PTPN11Q06124 597 aaPredicted RBP14.22□□□□□ -0.13
CHD2-218ENST00000629346 IKBKEQ14164 716 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 EPC2Q52LR7 807 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 CAGE1Q8TC20 777 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 COPS5Q92905 334 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 PRRX2Q99811 253 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 INSL6Q9Y581 213 aa14.22□□□□□ -0.13
CHD2-218ENST00000629346 TRIP12Q14669 1992 aaPredicted RBP14.22□□□□□ -0.13
CHD2-218ENST00000629346 MINDY4BA8MYZ0 360 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms