RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 FAM13BQ9NYF5 915 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 PPP1R9AQ9ULJ8 1098 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 FZD1Q9UP38 647 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 SCN4AP35499 1836 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 MYPNQ86TC9 1320 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 MYH15Q9Y2K3 1946 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 A0A1B0GVL5 298 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 SYCE3A1L190 88 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 GOLGA6L3A6NEY3 463 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 USP17L15C9J2P7 530 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 USP17L13C9JLJ4 530 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 USP17L11C9JVI0 530 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 USP17L18D6R9N7 530 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 USP17L22D6RA61 530 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 USP17L17D6RBQ6 530 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 USP17L19D6RCP7 530 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 USP17L20D6RJB6 530 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 CXCL11O14625 94 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 CCNT1O60563 726 aaKnown RBP8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 PFKFB1P16118 471 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 GCFC2P16383 781 aaKnown RBP8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 LONP1P36776 959 aaKnown RBP8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 NDUFA8P51970 172 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 FKBP1BP68106 108 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 USP17L24Q0WX57 530 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 SNW1Q13573 536 aaKnown RBP8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 UBE2SQ16763 222 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 LETM2Q2VYF4 491 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 PPP4R3AQ6IN85 833 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 SHC4Q6S5L8 630 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 LRSAM1Q6UWE0 723 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 LDHDQ86WU2 507 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 IFNL1Q8IU54 200 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 FMR1NBQ8N0W7 255 aaPredicted RBP8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 TNMDQ9H2S6 317 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 EHMT1Q9H9B1 1298 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 SLC38A10Q9HBR0 1119 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 FBXO28Q9NVF7 368 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 TMEM260Q9NX78 707 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 CCPG1Q9ULG6 757 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 HPSEQ9Y251 543 aa8.57□□□□□ -1.04
PTP4A1-206ENST00000627002 MYH6P13533 1939 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 SPDYE5A6NIY4 337 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 SPDYE3A6NKU9 549 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 GCOM1H8Y6P7 765 aaPredicted RBP8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 WNT7AO00755 349 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 MEIS2O14770 477 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 NEMFO60524 1076 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 ZNF202O95125 648 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 OR52Z1P0C646 297 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 POLR2MP0CAP2 368 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 SYKP43405 635 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 USP11P51784 963 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 OAZ1P54368 228 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 PPIL2Q13356 520 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 COG2Q14746 738 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 USP17L6PQ6QN14 398 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 MOXD1Q6UVY6 613 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 DLK2Q6UY11 383 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 DTHD1Q6ZMT9 781 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 CATSPERGQ6ZRH7 1159 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 MCF2L2Q86YR7 1114 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 C4orf32Q8N8J7 132 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 PROCA1Q8NCQ7 364 aaPredicted RBP8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 CCDC34Q96HJ3 373 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 TIGD1Q96MW7 591 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 CLIC6Q96NY7 704 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 PYM1Q9BRP8 204 aaKnown RBP8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 ANO3Q9BYT9 981 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 MAF1Q9H063 256 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 CSRNP2Q9H175 543 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 ELP3Q9H9T3 547 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 HOXC10Q9NYD6 342 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 MAP3K20Q9NYL2 800 aaKnown RBP8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 HOOK1Q9UJC3 728 aaKnown RBP8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 PCDHB13Q9Y5F0 798 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 ATAD5Q96QE3 1844 aa8.56□□□□□ -1.04
PTP4A1-206ENST00000627002 A0A0G2JLL6 359 aaPredicted RBP8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 FSD2A1L4K1 749 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 VWA3AA6NCI4 1184 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 VWA5AO00534 786 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 OPLAHO14841 1288 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 SREBF1P36956 1147 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 TXLNAP40222 546 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 DGKZQ13574 1117 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 CALCRLQ16602 461 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 LDLRAD1Q5T700 205 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 L1TD1Q5T7N2 865 aaKnown RBP8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 MAP1SQ66K74 1059 aaPredicted RBP8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 RBM43Q6ZSC3 357 aaKnown RBP8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 PRRT2Q7Z6L0 340 aaPredicted RBP8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 ELOA2Q8IYF1 753 aaPredicted RBP8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 OTUD5Q96G74 571 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 AK8Q96MA6 479 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 SDF4Q9BRK5 362 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 TSPY26PQ9H489 355 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 USP25Q9UHP3 1055 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 KCNH3Q9ULD8 1083 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 KCNH4Q9UQ05 1017 aa8.55□□□□□ -1.04
PTP4A1-206ENST00000627002 RABGAP1Q9Y3P9 1069 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms