RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 TAOK3Q9H2K8 898 aa22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 SYDE2Q5VT97 1194 aa22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 VSTM4Q8IW00 320 aa22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 MTMR14Q8NCE2 650 aa22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 NFKBIEO00221 500 aa22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 WNT10BO00744 389 aa22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 ZNF658Q5TYW1 1059 aaPredicted RBP22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 CIAPIN1Q6FI81 312 aa22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 GJA10Q969M2 543 aa22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 ZBED3Q96IU2 234 aaPredicted RBP22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 ZBTB21Q9ULJ3 1066 aa22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 MAPK8IP1Q9UQF2 711 aa22.14■■□□□ 1.13
CHRNA4-209ENST00000627000 KLRC4O43908 158 aa22.13■■□□□ 1.13
CHRNA4-209ENST00000627000 POLD1P28340 1107 aa22.13■■□□□ 1.13
CHRNA4-209ENST00000627000 USH1GQ495M9 461 aa22.13■■□□□ 1.13
CHRNA4-209ENST00000627000 PPP4R3AQ6IN85 833 aa22.13■■□□□ 1.13
CHRNA4-209ENST00000627000 DDX25Q9UHL0 483 aaKnown RBP22.13■■□□□ 1.13
CHRNA4-209ENST00000627000 POTEMA6NI47 508 aa22.12■■□□□ 1.13
CHRNA4-209ENST00000627000 FXR2P51116 673 aaKnown RBP eCLIP22.12■■□□□ 1.13
CHRNA4-209ENST00000627000 KMT5BQ4FZB7 885 aa22.12■■□□□ 1.13
CHRNA4-209ENST00000627000 P2RX7Q99572 595 aaKnown RBP22.12■■□□□ 1.13
CHRNA4-209ENST00000627000 AMNQ9BXJ7 453 aa22.12■■□□□ 1.13
CHRNA4-209ENST00000627000 MTFR1LQ9H019 292 aa22.12■■□□□ 1.13
CHRNA4-209ENST00000627000 RMND1Q9NWS8 449 aa22.12■■□□□ 1.13
CHRNA4-209ENST00000627000 LRWD1Q9UFC0 647 aa22.12■■□□□ 1.13
CHRNA4-209ENST00000627000 CCDC150Q8NCX0 1101 aa22.12■■□□□ 1.13
CHRNA4-209ENST00000627000 UIMC1Q96RL1 719 aa22.12■■□□□ 1.13
CHRNA4-209ENST00000627000 SMCHD1A6NHR9 2005 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 MEIS2O14770 477 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 PRCPP42785 496 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 GOLGA8FQ08AF8 430 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 GOLGA8DPQ0D2H9 430 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 FKBP1CQ5VVH2 108 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 APTXQ7Z2E3 356 aaKnown RBP22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 FBXO11Q86XK2 927 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 JDP2Q8WYK2 163 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 HAS1Q92839 578 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 ARHGEF10LQ9HCE6 1279 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 PGAP2Q9UHJ9 254 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 USP27XA6NNY8 438 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 SFPQP23246 707 aaKnown RBP eCLIP22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 GRB10Q13322 594 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 CDKAL1Q5VV42 579 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 BTNL9Q6UXG8 535 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 NUDT12Q9BQG2 462 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 ANO3Q9BYT9 981 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 CUEDC2Q9H467 287 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 MYOZ2Q9NPC6 264 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 PRR12Q9ULL5 1215 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 TMX2Q9Y320 296 aa22.11■■□□□ 1.13
CHRNA4-209ENST00000627000 EGFRP00533 1210 aa22.1■■□□□ 1.13
CHRNA4-209ENST00000627000 TPM2P07951 284 aa22.1■■□□□ 1.13
CHRNA4-209ENST00000627000 DHX8Q14562 1220 aaKnown RBP22.1■■□□□ 1.13
CHRNA4-209ENST00000627000 TMEM266Q2M3C6 531 aa22.1■■□□□ 1.13
CHRNA4-209ENST00000627000 FAM83AQ86UY5 434 aa22.1■■□□□ 1.13
CHRNA4-209ENST00000627000 NELFBQ8WX92 580 aa22.1■■□□□ 1.13
CHRNA4-209ENST00000627000 PNMA5Q96PV4 448 aa22.1■■□□□ 1.13
CHRNA4-209ENST00000627000 PAK1Q13153 545 aa22.09■■□□□ 1.13
CHRNA4-209ENST00000627000 CCDC84Q86UT8 332 aaPredicted RBP22.09■■□□□ 1.13
CHRNA4-209ENST00000627000 CALML4Q96GE6 196 aa22.09■■□□□ 1.13
CHRNA4-209ENST00000627000 RWDD2AQ9UIY3 292 aa22.09■■□□□ 1.13
CHRNA4-209ENST00000627000 KCNB1Q14721 858 aa22.09■■□□□ 1.13
CHRNA4-209ENST00000627000 ZYXQ15942 572 aaKnown RBP22.09■■□□□ 1.13
CHRNA4-209ENST00000627000 FAM83BQ5T0W9 1011 aa22.09■■□□□ 1.13
CHRNA4-209ENST00000627000 TRIM9Q9C026 710 aa22.09■■□□□ 1.13
CHRNA4-209ENST00000627000 GLT8D2Q9H1C3 349 aa22.09■■□□□ 1.13
CHRNA4-209ENST00000627000 BLOC1S4Q9NUP1 217 aa22.09■■□□□ 1.13
CHRNA4-209ENST00000627000 TBC1D12O60347 775 aa22.08■■□□□ 1.13
CHRNA4-209ENST00000627000 MYL1P05976 194 aa22.08■■□□□ 1.13
CHRNA4-209ENST00000627000 HSP90AA2PQ14568 343 aaPredicted RBP22.08■■□□□ 1.13
CHRNA4-209ENST00000627000 NR1I3Q14994 352 aa22.08■■□□□ 1.13
CHRNA4-209ENST00000627000 R3HDM1Q15032 1099 aaKnown RBP22.08■■□□□ 1.13
CHRNA4-209ENST00000627000 C16orf45Q96MC5 204 aaPredicted RBP22.08■■□□□ 1.13
CHRNA4-209ENST00000627000 GLIS2Q9BZE0 524 aaPredicted RBP22.08■■□□□ 1.13
CHRNA4-209ENST00000627000 MAGEF1Q9HAY2 307 aa22.08■■□□□ 1.13
CHRNA4-209ENST00000627000 SYNPO2Q9UMS6 1093 aa22.08■■□□□ 1.13
CHRNA4-209ENST00000627000 BCS1LQ9Y276 419 aa22.08■■□□□ 1.13
CHRNA4-209ENST00000627000 A0A1B0GTH6 734 aa22.08■■□□□ 1.12
CHRNA4-209ENST00000627000 OPLAHO14841 1288 aa22.08■■□□□ 1.12
CHRNA4-209ENST00000627000 TEX33O43247 280 aa22.08■■□□□ 1.12
CHRNA4-209ENST00000627000 CAP2P40123 477 aa22.08■■□□□ 1.12
CHRNA4-209ENST00000627000 TPD52L1Q16890 204 aaPredicted RBP22.08■■□□□ 1.12
CHRNA4-209ENST00000627000 RHOBTB3O94955 611 aa22.07■■□□□ 1.12
CHRNA4-209ENST00000627000 GCFC2P16383 781 aaKnown RBP22.07■■□□□ 1.12
CHRNA4-209ENST00000627000 STAT2P52630 851 aa22.07■■□□□ 1.12
CHRNA4-209ENST00000627000 PDIA5Q14554 519 aa22.07■■□□□ 1.12
CHRNA4-209ENST00000627000 ADSSL1Q8N142 457 aa22.07■■□□□ 1.12
CHRNA4-209ENST00000627000 SNX29Q8TEQ0 813 aa22.07■■□□□ 1.12
CHRNA4-209ENST00000627000 TRIM49BA6NDI0 452 aa22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 C7orf25Q9BPX7 421 aa22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 GOPCQ9HD26 462 aa22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 MARCH6O60337 910 aa22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 PMS1P54277 932 aaKnown RBP22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 ASIC1P78348 528 aa22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 RASSF7Q02833 373 aa22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 TBX2Q13207 712 aaPredicted RBP22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 MCM6Q14566 821 aa22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 RAB34Q9BZG1 259 aa22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 TRMT1Q9NXH9 659 aaKnown RBP22.06■■□□□ 1.12
CHRNA4-209ENST00000627000 AP3B2Q13367 1082 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms