RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 TMTC3Q6ZXV5 915 aa23.17■■□□□ 1.3
PNKP-219ENST00000626274 PIBF1Q8WXW3 757 aa23.17■■□□□ 1.3
PNKP-219ENST00000626274 PURBQ96QR8 312 aaKnown RBP23.17■■□□□ 1.3
PNKP-219ENST00000626274 NAP1L2Q9ULW6 460 aaPredicted RBP23.17■■□□□ 1.3
PNKP-219ENST00000626274 PDE4DIPQ5VU43 2346 aa23.17■■□□□ 1.3
PNKP-219ENST00000626274 LOC102724159A0A0B4J2E5 919 aa23.16■■□□□ 1.3
PNKP-219ENST00000626274 ANAPC15P60006 121 aa23.16■■□□□ 1.3
PNKP-219ENST00000626274 APOBRQ0VD83 1088 aa23.16■■□□□ 1.3
PNKP-219ENST00000626274 ACVR2BQ13705 512 aa23.16■■□□□ 1.3
PNKP-219ENST00000626274 PWP2Q15269 919 aaKnown RBP23.16■■□□□ 1.3
PNKP-219ENST00000626274 UBE2Q1Q7Z7E8 422 aa23.16■■□□□ 1.3
PNKP-219ENST00000626274 CMTR1Q8N1G2 835 aaKnown RBP23.16■■□□□ 1.3
PNKP-219ENST00000626274 TBC1D5Q92609 795 aa23.16■■□□□ 1.3
PNKP-219ENST00000626274 SEC63Q9UGP8 760 aaKnown RBP23.16■■□□□ 1.3
PNKP-219ENST00000626274 ZHX1Q9UKY1 873 aaPredicted RBP23.16■■□□□ 1.3
PNKP-219ENST00000626274 GOLGA8AA7E2F4 631 aa23.15■■□□□ 1.3
PNKP-219ENST00000626274 GOLGA8BA8MQT2 603 aa23.15■■□□□ 1.3
PNKP-219ENST00000626274 AKR1A1P14550 325 aa23.15■■□□□ 1.3
PNKP-219ENST00000626274 ALDH5A1P51649 535 aaPredicted RBP23.15■■□□□ 1.3
PNKP-219ENST00000626274 PPP2R5BQ15173 497 aa23.15■■□□□ 1.3
PNKP-219ENST00000626274 DNERQ8NFT8 737 aa23.15■■□□□ 1.3
PNKP-219ENST00000626274 FAM184BQ9ULE4 1060 aa23.15■■□□□ 1.3
PNKP-219ENST00000626274 BRCA2P51587 3418 aa23.14■■□□□ 1.3
PNKP-219ENST00000626274 SEC24BO95487 1268 aa23.14■■□□□ 1.29
PNKP-219ENST00000626274 CFBP00751 764 aa23.14■■□□□ 1.29
PNKP-219ENST00000626274 ANO1Q5XXA6 986 aa23.14■■□□□ 1.29
PNKP-219ENST00000626274 CCDC82Q8N4S0 544 aa23.14■■□□□ 1.29
PNKP-219ENST00000626274 SAMD3Q8N6K7 520 aa23.14■■□□□ 1.29
PNKP-219ENST00000626274 SYTL5Q8TDW5 730 aaPredicted RBP23.14■■□□□ 1.29
PNKP-219ENST00000626274 MORC4Q8TE76 937 aa23.14■■□□□ 1.29
PNKP-219ENST00000626274 MPHOSPH6Q99547 160 aaKnown RBP23.14■■□□□ 1.29
PNKP-219ENST00000626274 UPF3BQ9BZI7 483 aaKnown RBP23.14■■□□□ 1.29
PNKP-219ENST00000626274 MAP3K20Q9NYL2 800 aaKnown RBP23.14■■□□□ 1.29
PNKP-219ENST00000626274 LRRC37A2A6NM11 1700 aa23.13■■□□□ 1.29
PNKP-219ENST00000626274 B4DLN1 442 aa23.13■■□□□ 1.29
PNKP-219ENST00000626274 OPLAHO14841 1288 aa23.13■■□□□ 1.29
PNKP-219ENST00000626274 RARBP10826 455 aa23.13■■□□□ 1.29
PNKP-219ENST00000626274 MRPL12P52815 198 aaKnown RBP23.13■■□□□ 1.29
PNKP-219ENST00000626274 GHRHRQ02643 423 aa23.13■■□□□ 1.29
PNKP-219ENST00000626274 NECAB2Q7Z6G3 386 aa23.13■■□□□ 1.29
PNKP-219ENST00000626274 PAWRQ96IZ0 340 aaKnown RBP23.13■■□□□ 1.29
PNKP-219ENST00000626274 KATNBL1Q9H079 304 aa23.13■■□□□ 1.29
PNKP-219ENST00000626274 CCDC196A0A1B0GTZ2 297 aa23.12■■□□□ 1.29
PNKP-219ENST00000626274 MNX1P50219 401 aaPredicted RBP23.12■■□□□ 1.29
PNKP-219ENST00000626274 METAP2P50579 478 aaKnown RBP eCLIP23.12■■□□□ 1.29
PNKP-219ENST00000626274 HSD17B4P51659 736 aa23.12■■□□□ 1.29
PNKP-219ENST00000626274 EVCP57679 992 aa23.12■■□□□ 1.29
PNKP-219ENST00000626274 C8orf34Q49A92 452 aa23.12■■□□□ 1.29
PNKP-219ENST00000626274 ARRDC4Q8NCT1 418 aa23.12■■□□□ 1.29
PNKP-219ENST00000626274 DIS3LQ8TF46 1054 aaKnown RBP23.12■■□□□ 1.29
PNKP-219ENST00000626274 FAM217BQ9NTX9 383 aaPredicted RBP23.12■■□□□ 1.29
PNKP-219ENST00000626274 CNTNAP5Q8WYK1 1306 aa23.11■■□□□ 1.29
PNKP-219ENST00000626274 CDC27P30260 824 aa23.11■■□□□ 1.29
PNKP-219ENST00000626274 TOB2Q14106 344 aaPredicted RBP23.11■■□□□ 1.29
PNKP-219ENST00000626274 CCDC144BQ3MJ40 725 aa23.11■■□□□ 1.29
PNKP-219ENST00000626274 TAAR1Q96RJ0 339 aa23.11■■□□□ 1.29
PNKP-219ENST00000626274 VTA1Q9NP79 307 aa23.11■■□□□ 1.29
PNKP-219ENST00000626274 PDRG1Q9NUG6 133 aa23.11■■□□□ 1.29
PNKP-219ENST00000626274 COL20A1Q9P218 1284 aa23.11■■□□□ 1.29
PNKP-219ENST00000626274 DDX49Q9Y6V7 483 aaKnown RBP23.11■■□□□ 1.29
PNKP-219ENST00000626274 PDE4DQ08499 809 aa23.1■■□□□ 1.29
PNKP-219ENST00000626274 EEPD1Q7L9B9 569 aa23.1■■□□□ 1.29
PNKP-219ENST00000626274 NSUN6Q8TEA1 469 aaKnown RBP23.1■■□□□ 1.29
PNKP-219ENST00000626274 IL17RAQ96F46 866 aa23.1■■□□□ 1.29
PNKP-219ENST00000626274 XPNPEP3Q9NQH7 507 aa23.1■■□□□ 1.29
PNKP-219ENST00000626274 NID2Q14112 1375 aa23.1■■□□□ 1.29
PNKP-219ENST00000626274 hCG_1642624A0A1W2PR95 340 aa23.09■■□□□ 1.29
PNKP-219ENST00000626274 GCOM1H8Y6P7 765 aaPredicted RBP23.09■■□□□ 1.29
PNKP-219ENST00000626274 DNM1LO00429 736 aa23.09■■□□□ 1.29
PNKP-219ENST00000626274 POLR2MP0CAP2 368 aa23.09■■□□□ 1.29
PNKP-219ENST00000626274 EDNRBP24530 442 aa23.09■■□□□ 1.29
PNKP-219ENST00000626274 ADD1P35611 737 aaKnown RBP23.09■■□□□ 1.29
PNKP-219ENST00000626274 FUT2Q10981 343 aa23.09■■□□□ 1.29
PNKP-219ENST00000626274 FBXO16Q8IX29 292 aaPredicted RBP23.09■■□□□ 1.29
PNKP-219ENST00000626274 RMDN3Q96TC7 470 aa23.09■■□□□ 1.29
PNKP-219ENST00000626274 HTATIP2Q9BUP3 242 aa23.09■■□□□ 1.29
PNKP-219ENST00000626274 C11orf49Q9H6J7 331 aa23.09■■□□□ 1.29
PNKP-219ENST00000626274 DUSP11O75319 330 aaKnown RBP23.08■■□□□ 1.29
PNKP-219ENST00000626274 PDIA3P30101 505 aaKnown RBP23.08■■□□□ 1.29
PNKP-219ENST00000626274 LENG1Q96BZ8 264 aaPredicted RBP23.08■■□□□ 1.29
PNKP-219ENST00000626274 IWS1Q96ST2 819 aa23.08■■□□□ 1.29
PNKP-219ENST00000626274 V9GY48 417 aaPredicted RBP23.08■■□□□ 1.29
PNKP-219ENST00000626274 KBTBD13C9JR72 458 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 MYCNP04198 464 aaPredicted RBP23.07■■□□□ 1.28
PNKP-219ENST00000626274 HOXA13P31271 388 aaPredicted RBP23.07■■□□□ 1.28
PNKP-219ENST00000626274 ADCYAP1R1P41586 468 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 TNFAIP2Q03169 654 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 LRRC41Q15345 812 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 GJC2Q5T442 439 aaPredicted RBP23.07■■□□□ 1.28
PNKP-219ENST00000626274 ARHGEF16Q5VV41 709 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 IQSEC1Q6DN90 963 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 TAPT1Q6NXT6 567 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 RNF180Q86T96 592 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 ZNF274Q96GC6 653 aaPredicted RBP23.07■■□□□ 1.28
PNKP-219ENST00000626274 PXMP2Q9NR77 195 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 PDGFCQ9NRA1 345 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 KIAA1217Q5T5P2 1943 aa23.07■■□□□ 1.28
PNKP-219ENST00000626274 ADCY6O43306 1168 aa23.06■■□□□ 1.28
PNKP-219ENST00000626274 PGK1P00558 417 aa23.06■■□□□ 1.28
PNKP-219ENST00000626274 COL6A1P12109 1028 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms