RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 BADQ92934 168 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 TRIM43Q96BQ3 446 aaPredicted RBP12.65□□□□□ -0.38
SSBP4-215ENST00000625926 JMJD4Q9H9V9 463 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 ABCB11O95342 1321 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 IFIT3O14879 490 aaKnown RBP12.64□□□□□ -0.39
SSBP4-215ENST00000625926 CTAGE5O15320 804 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 ZEB2O60315 1214 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 BEX3Q00994 111 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 PDE4DQ08499 809 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 SART3Q15020 963 aaKnown RBP12.64□□□□□ -0.39
SSBP4-215ENST00000625926 QRICH1Q2TAL8 776 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 CENPQQ7L2Z9 268 aaPredicted RBP12.64□□□□□ -0.39
SSBP4-215ENST00000625926 TLK2Q86UE8 772 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 MCF2L2Q86YR7 1114 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 DNERQ8NFT8 737 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 LRCH3Q96II8 777 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 TMEM39AQ9NV64 488 aa12.64□□□□□ -0.39
SSBP4-215ENST00000625926 MRPL11Q9Y3B7 192 aaKnown RBP12.64□□□□□ -0.39
SSBP4-215ENST00000625926 MROH7Q68CQ1 1323 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 PARP14Q460N5 1801 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 A0A0U1RQG5 324 aaPredicted RBP12.63□□□□□ -0.39
SSBP4-215ENST00000625926 KLRF2D3W0D1 207 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 KIAA0355O15063 1070 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 CABYRO75952 493 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 RAG1P15918 1043 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 CDK7P50613 346 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 FAAP100Q0VG06 881 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 FSCN1Q16658 493 aaKnown RBP12.63□□□□□ -0.39
SSBP4-215ENST00000625926 DUSP28Q4G0W2 176 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 FBXO11Q86XK2 927 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 STAG2Q8N3U4 1231 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 AMNQ9BXJ7 453 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 WDR11Q9BZH6 1224 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
SSBP4-215ENST00000625926 RBM8AQ9Y5S9 174 aaKnown RBP12.63□□□□□ -0.39
SSBP4-215ENST00000625926 LAMA3Q16787 3333 aa12.62□□□□□ -0.39
SSBP4-215ENST00000625926 RBM47A0AV96 593 aaKnown RBP12.62□□□□□ -0.39
SSBP4-215ENST00000625926 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
SSBP4-215ENST00000625926 ARVCFO00192 962 aa12.62□□□□□ -0.39
SSBP4-215ENST00000625926 EDNRBP24530 442 aa12.62□□□□□ -0.39
SSBP4-215ENST00000625926 WTAPQ15007 396 aa12.62□□□□□ -0.39
SSBP4-215ENST00000625926 TMEM63BQ5T3F8 832 aa12.62□□□□□ -0.39
SSBP4-215ENST00000625926 CXCL17Q6UXB2 119 aa12.62□□□□□ -0.39
SSBP4-215ENST00000625926 STOX1Q6ZVD7 989 aa12.62□□□□□ -0.39
SSBP4-215ENST00000625926 CHST3Q7LGC8 479 aa12.62□□□□□ -0.39
SSBP4-215ENST00000625926 TBC1D5Q92609 795 aa12.62□□□□□ -0.39
SSBP4-215ENST00000625926 TAF6LQ9Y6J9 622 aa12.62□□□□□ -0.39
SSBP4-215ENST00000625926 ZBTB5O15062 677 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 PTGS1P23219 599 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 ITGB8P26012 769 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 TRAF1Q13077 416 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 GRM4Q14833 912 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 BMP2KLQ5H9B9 411 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 TMEM67Q5HYA8 995 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 CATIPQ7Z7H3 387 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 SYTL5Q8TDW5 730 aaPredicted RBP12.61□□□□□ -0.39
SSBP4-215ENST00000625926 NSUN6Q8TEA1 469 aaKnown RBP12.61□□□□□ -0.39
SSBP4-215ENST00000625926 SCFD2Q8WU76 684 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 MTMR8Q96EF0 704 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 ESYT1Q9BSJ8 1104 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 SEZ6LQ9BYH1 1024 aa12.61□□□□□ -0.39
SSBP4-215ENST00000625926 LSG1Q9H089 658 aaKnown RBP12.61□□□□□ -0.39
SSBP4-215ENST00000625926 NKRFO15226 690 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■□□□□ 9.3
SSBP4-215ENST00000625926 TLR3O15455 904 aaKnown RBP12.6□□□□□ -0.39
SSBP4-215ENST00000625926 TIMP1P01033 207 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 ANTXR2P58335 489 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 TROAPQ12815 778 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 ITGA7Q13683 1181 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 PPP2R5BQ15173 497 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 SHHQ15465 462 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 MB21D2Q8IYB1 491 aaPredicted RBP12.6□□□□□ -0.39
SSBP4-215ENST00000625926 SLC43A3Q8NBI5 491 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 IGDCC4Q8TDY8 1250 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 TAAR1Q96RJ0 339 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 IWS1Q96ST2 819 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 MTA3Q9BTC8 594 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 RIOX1Q9H6W3 641 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 SENP2Q9HC62 589 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 TBX21Q9UL17 535 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 PCDHA1Q9Y5I3 950 aa12.6□□□□□ -0.39
SSBP4-215ENST00000625926 COL11A1P12107 1806 aaPredicted RBP12.6□□□□□ -0.39
SSBP4-215ENST00000625926 MYH4Q9Y623 1939 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 SLC27A2O14975 620 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 CFBP00751 764 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 TXNP10599 105 aaKnown RBP12.59□□□□□ -0.39
SSBP4-215ENST00000625926 MCM5P33992 734 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 CPT1AP50416 773 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 FPGSQ05932 587 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 TTLL4Q14679 1199 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 STXBP2Q15833 593 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 BRDTQ58F21 947 aaPredicted RBP12.59□□□□□ -0.39
SSBP4-215ENST00000625926 C9orf50Q5SZB4 431 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 ARHGEF16Q5VV41 709 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 HOMER1Q86YM7 354 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 SAMD3Q8N6K7 520 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 OR6J1Q8NGC5 347 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms