RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 PTCHD1Q96NR3 888 aa4.6□□□□□ -1.67
CHD2-203ENST00000625243 GORASP1Q9BQQ3 440 aa4.6□□□□□ -1.67
CHD2-203ENST00000625243 RSRP1Q9BUV0 290 aa4.6□□□□□ -1.67
CHD2-203ENST00000625243 SRRTQ9BXP5 876 aaKnown RBP4.6□□□□□ -1.67
CHD2-203ENST00000625243 CD248Q9HCU0 757 aa4.6□□□□□ -1.67
CHD2-203ENST00000625243 PPP4R1LQ9P1A2 415 aa4.6□□□□□ -1.67
CHD2-203ENST00000625243 NUDT5Q9UKK9 219 aa4.6□□□□□ -1.67
CHD2-203ENST00000625243 NPEPPSL1A6NEC2 478 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 BRD1O95696 1058 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 CTSHP09668 335 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 CYP2C8P10632 490 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 GARTP22102 1010 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 THBS2P35442 1172 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 NOP2P46087 812 aaKnown RBP4.59□□□□□ -1.67
CHD2-203ENST00000625243 PSMD2Q13200 908 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 PWP1Q13610 501 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 SURF1Q15526 300 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 C9orf131Q5VYM1 1079 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 TXNDC5Q8NBS9 432 aaKnown RBP4.59□□□□□ -1.67
CHD2-203ENST00000625243 WDR26Q9H7D7 661 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 LTBP3Q9NS15 1303 aa4.59□□□□□ -1.67
CHD2-203ENST00000625243 C8BP07358 591 aa4.58□□□□□ -1.68
CHD2-203ENST00000625243 FHL2Q14192 279 aa4.58□□□□□ -1.68
CHD2-203ENST00000625243 C7orf61Q8IZ16 206 aa4.58□□□□□ -1.68
CHD2-203ENST00000625243 LCORQ96JN0 433 aaPredicted RBP4.58□□□□□ -1.68
CHD2-203ENST00000625243 SYT3Q9BQG1 590 aa4.58□□□□□ -1.68
CHD2-203ENST00000625243 C11orf84Q9BUA3 381 aaPredicted RBP4.58□□□□□ -1.68
CHD2-203ENST00000625243 ZNF341Q9BYN7 854 aa4.58□□□□□ -1.68
CHD2-203ENST00000625243 EHMT1Q9H9B1 1298 aa4.58□□□□□ -1.68
CHD2-203ENST00000625243 PARP2Q9UGN5 583 aa4.58□□□□□ -1.68
CHD2-203ENST00000625243 DDX3XO00571 662 aaKnown RBP eCLIP4.57□□□□□ -1.68
CHD2-203ENST00000625243 NME1P15531 152 aaKnown RBP4.57□□□□□ -1.68
CHD2-203ENST00000625243 SMN1Q16637 294 aaKnown RBP4.57□□□□□ -1.68
CHD2-203ENST00000625243 NOL9Q5SY16 702 aaKnown RBP4.57□□□□□ -1.68
CHD2-203ENST00000625243 CIR1Q86X95 450 aaPredicted RBP4.57□□□□□ -1.68
CHD2-203ENST00000625243 CCDC144CPQ8IYA2 1237 aa4.57□□□□□ -1.68
CHD2-203ENST00000625243 LZTR1Q8N653 840 aa4.57□□□□□ -1.68
CHD2-203ENST00000625243 KYQ8NBH2 561 aa4.57□□□□□ -1.68
CHD2-203ENST00000625243 NETO2Q8NC67 525 aa4.57□□□□□ -1.68
CHD2-203ENST00000625243 FCRL3Q96P31 734 aaPredicted RBP4.57□□□□□ -1.68
CHD2-203ENST00000625243 ROBO2Q9HCK4 1378 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 SHOXO15266 292 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 GPR42O15529 346 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 B4GALT3O60512 393 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 ZBTB7AO95365 584 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 ACRP10323 421 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 PDIA4P13667 645 aaKnown RBP4.56□□□□□ -1.68
CHD2-203ENST00000625243 DAB2P98082 770 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 EAPPQ56P03 285 aaPredicted RBP4.56□□□□□ -1.68
CHD2-203ENST00000625243 SPDYAQ5MJ70 313 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 PLEKHH3Q7Z736 793 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 DNERQ8NFT8 737 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 LRRC3Q9BY71 257 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 PCDH18Q9HCL0 1135 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 SUCOQ9UBS9 1254 aaKnown RBP4.56□□□□□ -1.68
CHD2-203ENST00000625243 FBLN5Q9UBX5 448 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 RWDD3Q9Y3V2 267 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 TCAF1Q9Y4C2 921 aa4.56□□□□□ -1.68
CHD2-203ENST00000625243 C9IYK1 514 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 IFNGR1P15260 489 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 SELENOPP49908 381 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 INHBEP58166 350 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 ZNF445P59923 1031 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 FBXL19Q6PCT2 694 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 STK32CQ86UX6 486 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 ZNF575Q86XF7 245 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 TTLL6Q8N841 843 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 IGDCC4Q8TDY8 1250 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 BRF1Q92994 677 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 DHRS1Q96LJ7 313 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 SLC9A7Q96T83 725 aa4.55□□□□□ -1.68
CHD2-203ENST00000625243 FAM86C2PA6NEL3 165 aa4.54□□□□□ -1.68
CHD2-203ENST00000625243 NPIPB8E9PQR5 432 aa4.54□□□□□ -1.68
CHD2-203ENST00000625243 TNFRSF10CO14798 259 aa4.54□□□□□ -1.68
CHD2-203ENST00000625243 MUSKO15146 869 aa4.54□□□□□ -1.68
CHD2-203ENST00000625243 CD3EP07766 207 aa4.54□□□□□ -1.68
CHD2-203ENST00000625243 CLCQ05315 142 aa4.54□□□□□ -1.68
CHD2-203ENST00000625243 R3HDM1Q15032 1099 aaKnown RBP4.54□□□□□ -1.68
CHD2-203ENST00000625243 LRRFIP1Q32MZ4 808 aaKnown RBP4.54□□□□□ -1.68
CHD2-203ENST00000625243 GK5Q6ZS86 529 aa4.54□□□□□ -1.68
CHD2-203ENST00000625243 WWC2-AS2Q96NR7 200 aa4.54□□□□□ -1.68
CHD2-203ENST00000625243 JADE2Q9NQC1 790 aa4.54□□□□□ -1.68
CHD2-203ENST00000625243 WDR33Q9C0J8 1336 aaKnown RBP4.53□□□□□ -1.68
CHD2-203ENST00000625243 C9orf118A6NHY6 69 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 PRR31Q5SQ13 230 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 CD300LDQ6UXZ3 194 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 FIBCD1Q8N539 461 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 FAM26EQ8N5C1 309 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 USP33Q8TEY7 942 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 CHFRQ96EP1 664 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 FAM161BQ96MY7 647 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 SEMA4AQ9H3S1 761 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 GP6Q9HCN6 339 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 KBTBD4Q9NVX7 518 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 SF3B6Q9Y3B4 125 aaKnown RBP4.53□□□□□ -1.68
CHD2-203ENST00000625243 TESMINQ9Y4I5 508 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 SUPT16HQ9Y5B9 1047 aaKnown RBP4.53□□□□□ -1.68
CHD2-203ENST00000625243 FHOD1Q9Y613 1164 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 IVNS1ABPQ9Y6Y0 642 aa4.53□□□□□ -1.68
CHD2-203ENST00000625243 GREM1O60565 184 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms