RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 UBE2SQ16763 222 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 ZFPM1Q8IX07 1006 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 P2RX5Q93086 422 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 CALML4Q96GE6 196 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 ZSWIM4Q9H7M6 989 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
TP53-227ENST00000622645 TNNI2P48788 182 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 GRB10Q13322 594 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 TEX35Q5T0J7 233 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
TP53-227ENST00000622645 KCTD1Q719H9 257 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 KRT27Q7Z3Y8 459 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 NUDT12Q9BQG2 462 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 TUBGCP2Q9BSJ2 902 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 BLOC1S4Q9NUP1 217 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 SUGT1Q9Y2Z0 365 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 CCNE1P24864 410 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 CACNB3P54284 484 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 MCM6Q14566 821 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 UTP14CQ5TAP6 766 aaKnown RBP13.4□□□□□ -0.26
TP53-227ENST00000622645 KIAA0895Q8NCT3 520 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 GJA10Q969M2 543 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 PNMA5Q96PV4 448 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 SLC39A2Q9NP94 309 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 PCDHAC2Q9Y5I4 1007 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 LTBP1Q14766 1721 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 USP17L10C9JJH3 530 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 G3V3G9 751 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 hCG_1984214I3L0E3 225 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 AMPD3Q01432 767 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 DYMQ7RTS9 669 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 KRT222Q8N1A0 295 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 SLC35F6Q8N357 371 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 ZNF713Q8N859 430 aaPredicted RBP13.4□□□□□ -0.26
TP53-227ENST00000622645 OR8K1Q8NGG5 319 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 CCDC47Q96A33 483 aaKnown RBP13.4□□□□□ -0.26
TP53-227ENST00000622645 FAM53CQ9NYF3 392 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 LUC7L2Q9Y383 392 aaKnown RBP13.4□□□□□ -0.26
TP53-227ENST00000622645 MYH8P13535 1937 aa13.4□□□□□ -0.26
TP53-227ENST00000622645 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 A0A1W2PQC6 194 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 MYMKA6NI61 221 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 FAM196BA6NMK8 535 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 RAD21O60216 631 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 TFRCP02786 760 aaKnown RBP13.39□□□□□ -0.27
TP53-227ENST00000622645 ARHGAP25P42331 645 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 KLK7P49862 253 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
TP53-227ENST00000622645 SV2BQ7L1I2 683 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 RSRC2Q7L4I2 434 aaKnown RBP13.39□□□□□ -0.27
TP53-227ENST00000622645 COL23A1Q86Y22 540 aaPredicted RBP13.39□□□□□ -0.27
TP53-227ENST00000622645 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 DBNDD1Q9H9R9 158 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 SWAP70Q9UH65 585 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 NPR1P16066 1061 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
TP53-227ENST00000622645 TCP10Q12799 353 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 TEKT1Q969V4 418 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 CNOT6LQ96LI5 555 aaKnown RBP13.39□□□□□ -0.27
TP53-227ENST00000622645 SEMA6BQ9H3T3 888 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 AGPAT5Q9NUQ2 364 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 REXO2Q9Y3B8 237 aaKnown RBP13.39□□□□□ -0.27
TP53-227ENST00000622645 FHOD1Q9Y613 1164 aa13.39□□□□□ -0.27
TP53-227ENST00000622645 EPN1Q9Y6I3 576 aaPredicted RBP13.39□□□□□ -0.27
TP53-227ENST00000622645 BICDL2A1A5D9 508 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 SEC31AO94979 1220 aaKnown RBP13.38□□□□□ -0.27
TP53-227ENST00000622645 NDUFA10O95299 355 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 DNM2P50570 870 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 TBC1D8BQ0IIM8 1120 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 ORC2Q13416 577 aaPredicted RBP13.38□□□□□ -0.27
TP53-227ENST00000622645 KIF4BQ2VIQ3 1234 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 WDR59Q6PJI9 974 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 LARP4BQ92615 738 aaKnown RBP13.38□□□□□ -0.27
TP53-227ENST00000622645 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 RIC8AQ9NPQ8 531 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 ST7Q9NRC1 585 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 ARGLU1Q9NWB6 273 aaPredicted RBP13.38□□□□□ -0.27
TP53-227ENST00000622645 TRIM10Q9UDY6 481 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 PUF60Q9UHX1 559 aaKnown RBP13.38□□□□□ -0.27
TP53-227ENST00000622645 CAPN11Q9UMQ6 739 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 RASSF10A6NK89 507 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 HLA-DOAP06340 250 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 BMS1Q14692 1282 aaKnown RBP13.38□□□□□ -0.27
TP53-227ENST00000622645 TMEM266Q2M3C6 531 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 CNNM4Q6P4Q7 775 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 TMCO3Q6UWJ1 677 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 HHIPL2Q6UWX4 724 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 NLGN1Q8N2Q7 840 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 SNX29Q8TEQ0 813 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 NOC3LQ8WTT2 800 aaKnown RBP13.38□□□□□ -0.27
TP53-227ENST00000622645 DNAJC7Q99615 494 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 GTPBP4Q9BZE4 634 aaKnown RBP13.38□□□□□ -0.27
TP53-227ENST00000622645 DNAJC18Q9H819 358 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 TFR2Q9UP52 801 aa13.38□□□□□ -0.27
TP53-227ENST00000622645 LRRC37AA6NMS7 1700 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms