RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 SPATC1LQ9H0A9 340 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 TXNRD2Q9NNW7 524 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 RBPJLQ9UBG7 517 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 CFAP45Q9UL16 551 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 RASSF10A6NK89 507 aa20.35■□□□□ 0.85
PTCHD3-202ENST00000622555 PIK3CDO00329 1044 aa20.35■□□□□ 0.85
PTCHD3-202ENST00000622555 IGF2BP3O00425 579 aaKnown RBP eCLIP20.35■□□□□ 0.85
PTCHD3-202ENST00000622555 FIBPO43427 364 aa20.35■□□□□ 0.85
PTCHD3-202ENST00000622555 DEKP35659 375 aaKnown RBP20.35■□□□□ 0.85
PTCHD3-202ENST00000622555 TOB1P50616 345 aaPredicted RBP20.35■□□□□ 0.85
PTCHD3-202ENST00000622555 INF2Q27J81 1249 aa20.35■□□□□ 0.85
PTCHD3-202ENST00000622555 TEX2Q8IWB9 1127 aa20.35■□□□□ 0.85
PTCHD3-202ENST00000622555 GDPD2Q9HCC8 539 aa20.35■□□□□ 0.85
PTCHD3-202ENST00000622555 AP3B2Q13367 1082 aa20.34■□□□□ 0.85
PTCHD3-202ENST00000622555 MCTP2Q6DN12 878 aa20.34■□□□□ 0.85
PTCHD3-202ENST00000622555 RIOX2Q8IUF8 465 aa20.34■□□□□ 0.85
PTCHD3-202ENST00000622555 ACAD9Q9H845 621 aa20.34■□□□□ 0.85
PTCHD3-202ENST00000622555 SPDYE3A6NKU9 549 aa20.33■□□□□ 0.85
PTCHD3-202ENST00000622555 GCLCP48506 637 aaPredicted RBP20.33■□□□□ 0.85
PTCHD3-202ENST00000622555 FCHSD1Q86WN1 690 aa20.33■□□□□ 0.85
PTCHD3-202ENST00000622555 IFNL1Q8IU54 200 aa20.33■□□□□ 0.85
PTCHD3-202ENST00000622555 CAPNS2Q96L46 248 aa20.33■□□□□ 0.85
PTCHD3-202ENST00000622555 ZIC5Q96T25 663 aa20.33■□□□□ 0.85
PTCHD3-202ENST00000622555 ANO3Q9BYT9 981 aa20.33■□□□□ 0.85
PTCHD3-202ENST00000622555 ZCCHC17Q9NP64 241 aaKnown RBP20.33■□□□□ 0.85
PTCHD3-202ENST00000622555 CLIC4Q9Y696 253 aa20.33■□□□□ 0.85
PTCHD3-202ENST00000622555 GOLGA6L22H0YM25 854 aa20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 FOSP01100 380 aaPredicted RBP20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 TRAPPC10P48553 1259 aa20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 HSD17B4P51659 736 aa20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 ANO1Q5XXA6 986 aa20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 NSMFQ6X4W1 530 aa20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 CHST13Q8NET6 341 aa20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 TBCKQ8TEA7 893 aa20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 MOV10L1Q9BXT6 1211 aaKnown RBP20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 SCAND2PQ9GZW5 306 aaPredicted RBP20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 RTEL1Q9NZ71 1219 aa20.33■□□□□ 0.84
PTCHD3-202ENST00000622555 MCM4P33991 863 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 ERVK-9P63128 1117 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 ERVK-24P63145 666 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 NOGQ13253 232 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 TAF1CQ15572 869 aaPredicted RBP20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 TTC38Q5R3I4 469 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 NCAPG2Q86XI2 1143 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 SAMD3Q8N6K7 520 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 ANKRD13CQ8N6S4 541 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 SPATA32Q96LK8 384 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 POLR3EQ9NVU0 708 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 PCDHB6Q9Y5E3 794 aa20.32■□□□□ 0.84
PTCHD3-202ENST00000622555 SLC25A27O95847 323 aa20.31■□□□□ 0.84
PTCHD3-202ENST00000622555 GHRHRQ02643 423 aa20.31■□□□□ 0.84
PTCHD3-202ENST00000622555 SF3A1Q15459 793 aaKnown RBP20.31■□□□□ 0.84
PTCHD3-202ENST00000622555 Q3C1V9 767 aa20.31■□□□□ 0.84
PTCHD3-202ENST00000622555 RNF207Q6ZRF8 634 aa20.31■□□□□ 0.84
PTCHD3-202ENST00000622555 NEK8Q86SG6 692 aa20.31■□□□□ 0.84
PTCHD3-202ENST00000622555 GPRC5AQ8NFJ5 357 aa20.31■□□□□ 0.84
PTCHD3-202ENST00000622555 MAP3K20Q9NYL2 800 aaKnown RBP20.31■□□□□ 0.84
PTCHD3-202ENST00000622555 FBXO40Q9UH90 709 aa20.31■□□□□ 0.84
PTCHD3-202ENST00000622555 COPB2P35606 906 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 TM4SF4P48230 202 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 NASPP49321 788 aaPredicted RBP20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 RPS6P62753 249 aaKnown RBP20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 STK38Q15208 465 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 CSPP1Q1MSJ5 1256 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 SLC30A10Q6XR72 485 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 LEO1Q8WVC0 666 aaPredicted RBP20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 WNT7AO00755 349 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 AOC2O75106 756 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 ERCC3P19447 782 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 ZNF174Q15697 407 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 LETM2Q2VYF4 491 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 EHMT1Q9H9B1 1298 aa20.3■□□□□ 0.84
PTCHD3-202ENST00000622555 YEATS4O95619 227 aa20.29■□□□□ 0.84
PTCHD3-202ENST00000622555 CCNA1P78396 465 aa20.29■□□□□ 0.84
PTCHD3-202ENST00000622555 BAATQ14032 418 aaPredicted RBP20.29■□□□□ 0.84
PTCHD3-202ENST00000622555 LINC00301Q8NCQ3 95 aa20.29■□□□□ 0.84
PTCHD3-202ENST00000622555 SYTL5Q8TDW5 730 aaPredicted RBP20.29■□□□□ 0.84
PTCHD3-202ENST00000622555 A1CFQ9NQ94 594 aaKnown RBP20.29■□□□□ 0.84
PTCHD3-202ENST00000622555 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.29■□□□□ 0.84
PTCHD3-202ENST00000622555 COL20A1Q9P218 1284 aa20.29■□□□□ 0.84
PTCHD3-202ENST00000622555 MORF4L1Q9UBU8 362 aa20.29■□□□□ 0.84
PTCHD3-202ENST00000622555 CEP131Q9UPN4 1083 aa20.29■□□□□ 0.84
PTCHD3-202ENST00000622555 DDX11L8A8MPP1 907 aa20.28■□□□□ 0.84
PTCHD3-202ENST00000622555 PRPF40AO75400 957 aaKnown RBP20.28■□□□□ 0.84
PTCHD3-202ENST00000622555 MCM7P33993 719 aa20.28■□□□□ 0.84
PTCHD3-202ENST00000622555 RCOR1Q9UKL0 485 aa20.28■□□□□ 0.84
PTCHD3-202ENST00000622555 CCNT1O60563 726 aaKnown RBP20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 SREBF1P36956 1147 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 ARHGAP4P98171 946 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 SLC39A14Q15043 492 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 PTPAQ15257 358 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 WDR78Q5VTH9 848 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 ANKRD35Q8N283 1001 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 TMEM87AQ8NBN3 555 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 SHCBP1Q8NEM2 672 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 MAF1Q9H063 256 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 MROH8Q9H579 483 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 CYP39A1Q9NYL5 469 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 ZNFX1Q9P2E3 1918 aaKnown RBP20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 ADGRA2Q96PE1 1338 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms