RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 GPCPD1Q9NPB8 672 aa24.62■■□□□ 1.53
PMPCA-212ENST00000622209 FRMPD2Q68DX3 1309 aaPredicted RBP24.61■■□□□ 1.53
PMPCA-212ENST00000622209 DLL1O00548 723 aa24.61■■□□□ 1.53
PMPCA-212ENST00000622209 MCM5P33992 734 aa24.61■■□□□ 1.53
PMPCA-212ENST00000622209 BEX3Q00994 111 aa24.61■■□□□ 1.53
PMPCA-212ENST00000622209 KRT32Q14532 448 aa24.61■■□□□ 1.53
PMPCA-212ENST00000622209 ZNF697Q5TEC3 545 aa24.61■■□□□ 1.53
PMPCA-212ENST00000622209 KCNB2Q92953 911 aa24.61■■□□□ 1.53
PMPCA-212ENST00000622209 PURBQ96QR8 312 aaKnown RBP24.61■■□□□ 1.53
PMPCA-212ENST00000622209 CYP39A1Q9NYL5 469 aa24.61■■□□□ 1.53
PMPCA-212ENST00000622209 ASTN1O14525 1302 aa24.61■■□□□ 1.53
PMPCA-212ENST00000622209 ELP1O95163 1332 aa24.61■■□□□ 1.53
PMPCA-212ENST00000622209 CTAGE5O15320 804 aa24.6■■□□□ 1.53
PMPCA-212ENST00000622209 FPGSQ05932 587 aa24.6■■□□□ 1.53
PMPCA-212ENST00000622209 BTNL9Q6UXG8 535 aa24.6■■□□□ 1.53
PMPCA-212ENST00000622209 EEPD1Q7L9B9 569 aa24.6■■□□□ 1.53
PMPCA-212ENST00000622209 RNPC3Q96LT9 517 aaKnown RBP24.6■■□□□ 1.53
PMPCA-212ENST00000622209 LTBP2Q14767 1821 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 ICAM1P05362 532 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 PTGS1P23219 599 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 HSPA4P34932 840 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 CDK7P50613 346 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 ANTXR2P58335 489 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 ZNF543Q08ER8 600 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 WTAPQ15007 396 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 GPATCH4Q5T3I0 446 aaKnown RBP24.59■■□□□ 1.53
PMPCA-212ENST00000622209 SYDE2Q5VT97 1194 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 CHST3Q7LGC8 479 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 RASEFQ8IZ41 740 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 IGDCC4Q8TDY8 1250 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 RANBP17Q9H2T7 1088 aaKnown RBP24.59■■□□□ 1.53
PMPCA-212ENST00000622209 PDGFCQ9NRA1 345 aa24.59■■□□□ 1.53
PMPCA-212ENST00000622209 A0A0U1RQG5 324 aaPredicted RBP24.58■■□□□ 1.53
PMPCA-212ENST00000622209 ARVCFO00192 962 aa24.58■■□□□ 1.53
PMPCA-212ENST00000622209 EIF5BO60841 1220 aaKnown RBP24.58■■□□□ 1.53
PMPCA-212ENST00000622209 TMEM67Q5HYA8 995 aa24.58■■□□□ 1.53
PMPCA-212ENST00000622209 TMEM87BQ96K49 555 aa24.58■■□□□ 1.53
PMPCA-212ENST00000622209 NEK1Q96PY6 1258 aa24.58■■□□□ 1.53
PMPCA-212ENST00000622209 SEMA6BQ9H3T3 888 aa24.58■■□□□ 1.53
PMPCA-212ENST00000622209 DYNC1LI2O43237 492 aaPredicted RBP24.57■■□□□ 1.52
PMPCA-212ENST00000622209 PRC1O43663 620 aa24.57■■□□□ 1.52
PMPCA-212ENST00000622209 TIMP1P01033 207 aa24.57■■□□□ 1.52
PMPCA-212ENST00000622209 SMPD1P17405 629 aa24.57■■□□□ 1.52
PMPCA-212ENST00000622209 SMAD3P84022 425 aaKnown RBP24.57■■□□□ 1.52
PMPCA-212ENST00000622209 BAATQ14032 418 aaPredicted RBP24.57■■□□□ 1.52
PMPCA-212ENST00000622209 FBXO16Q8IX29 292 aaPredicted RBP24.57■■□□□ 1.52
PMPCA-212ENST00000622209 TMTC2Q8N394 836 aa24.57■■□□□ 1.52
PMPCA-212ENST00000622209 AP5M1Q9H0R1 490 aa24.57■■□□□ 1.52
PMPCA-212ENST00000622209 TBX21Q9UL17 535 aa24.57■■□□□ 1.52
PMPCA-212ENST00000622209 GNEQ9Y223 722 aaKnown RBP24.57■■□□□ 1.52
PMPCA-212ENST00000622209 MROH7Q68CQ1 1323 aa24.57■■□□□ 1.52
PMPCA-212ENST00000622209 ASPRV1Q53RT3 343 aa24.56■■□□□ 1.52
PMPCA-212ENST00000622209 TMEM63BQ5T3F8 832 aa24.56■■□□□ 1.52
PMPCA-212ENST00000622209 TAPT1Q6NXT6 567 aa24.56■■□□□ 1.52
PMPCA-212ENST00000622209 CXCL17Q6UXB2 119 aa24.56■■□□□ 1.52
PMPCA-212ENST00000622209 TLK2Q86UE8 772 aa24.56■■□□□ 1.52
PMPCA-212ENST00000622209 USP26Q9BXU7 913 aa24.56■■□□□ 1.52
PMPCA-212ENST00000622209 NFIBO00712 420 aa24.55■■□□□ 1.52
PMPCA-212ENST00000622209 HMGB1P09429 215 aaKnown RBP24.55■■□□□ 1.52
PMPCA-212ENST00000622209 NKX3-2P78367 333 aa24.55■■□□□ 1.52
PMPCA-212ENST00000622209 FSCN1Q16658 493 aaKnown RBP24.55■■□□□ 1.52
PMPCA-212ENST00000622209 IQSEC1Q6DN90 963 aa24.55■■□□□ 1.52
PMPCA-212ENST00000622209 CDX2Q99626 313 aaPredicted RBP24.55■■□□□ 1.52
PMPCA-212ENST00000622209 WDR19Q8NEZ3 1342 aa24.55■■□□□ 1.52
PMPCA-212ENST00000622209 PARP1P09874 1014 aaKnown RBP24.54■■□□□ 1.52
PMPCA-212ENST00000622209 DHX32Q7L7V1 743 aaKnown RBP24.54■■□□□ 1.52
PMPCA-212ENST00000622209 TTYH1Q9H313 450 aaPredicted RBP24.54■■□□□ 1.52
PMPCA-212ENST00000622209 LY9Q9HBG7 655 aa24.54■■□□□ 1.52
PMPCA-212ENST00000622209 SNX14Q9Y5W7 946 aa24.54■■□□□ 1.52
PMPCA-212ENST00000622209 PTPDC1A2A3K4 754 aa24.53■■□□□ 1.52
PMPCA-212ENST00000622209 TLR3O15455 904 aaKnown RBP24.53■■□□□ 1.52
PMPCA-212ENST00000622209 LIFRP42702 1097 aa24.53■■□□□ 1.52
PMPCA-212ENST00000622209 ADCK5Q3MIX3 580 aa24.53■■□□□ 1.52
PMPCA-212ENST00000622209 MFSD5Q6N075 450 aa24.53■■□□□ 1.52
PMPCA-212ENST00000622209 CATIPQ7Z7H3 387 aa24.53■■□□□ 1.52
PMPCA-212ENST00000622209 FAM126BQ8IXS8 530 aa24.53■■□□□ 1.52
PMPCA-212ENST00000622209 PPP1R12CQ9BZL4 782 aa24.53■■□□□ 1.52
PMPCA-212ENST00000622209 SENP2Q9HC62 589 aa24.53■■□□□ 1.52
PMPCA-212ENST00000622209 SH2B2O14492 632 aaPredicted RBP24.52■■□□□ 1.52
PMPCA-212ENST00000622209 GOLGA8HP0CJ92 632 aa24.52■■□□□ 1.52
PMPCA-212ENST00000622209 CALML3P27482 149 aa24.52■■□□□ 1.52
PMPCA-212ENST00000622209 EXOSC10Q01780 885 aaKnown RBP24.52■■□□□ 1.52
PMPCA-212ENST00000622209 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.52■■□□□ 1.525e-9■■■□□ 18
PMPCA-212ENST00000622209 VTA1Q9NP79 307 aa24.52■■□□□ 1.52
PMPCA-212ENST00000622209 ADD3Q9UEY8 706 aaKnown RBP24.52■■□□□ 1.52
PMPCA-212ENST00000622209 ZEB2O60315 1214 aa24.51■■□□□ 1.51
PMPCA-212ENST00000622209 CSF2RAP15509 400 aa24.51■■□□□ 1.51
PMPCA-212ENST00000622209 ALDH5A1P51649 535 aaPredicted RBP24.51■■□□□ 1.51
PMPCA-212ENST00000622209 TROAPQ12815 778 aa24.51■■□□□ 1.51
PMPCA-212ENST00000622209 COL9A3Q14050 684 aaPredicted RBP24.51■■□□□ 1.51
PMPCA-212ENST00000622209 SLC30A10Q6XR72 485 aa24.51■■□□□ 1.51
PMPCA-212ENST00000622209 C16orf59Q7L2K0 433 aa24.51■■□□□ 1.51
PMPCA-212ENST00000622209 MORC4Q8TE76 937 aa24.51■■□□□ 1.51
PMPCA-212ENST00000622209 CLEC4DQ8WXI8 215 aa24.51■■□□□ 1.51
PMPCA-212ENST00000622209 MAP3K14Q99558 947 aa24.51■■□□□ 1.51
PMPCA-212ENST00000622209 PNMA2Q9UL42 364 aa24.51■■□□□ 1.51
PMPCA-212ENST00000622209 CABYRO75952 493 aa24.5■■□□□ 1.51
PMPCA-212ENST00000622209 CYP2C18P33260 490 aa24.5■■□□□ 1.51
PMPCA-212ENST00000622209 PSMC6P62333 389 aa24.5■■□□□ 1.51
PMPCA-212ENST00000622209 PPIGQ13427 754 aaKnown RBP eCLIP24.5■■□□□ 1.512e-7■■□□□ 13.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms