RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 MTMR8Q96EF0 704 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 TRIM47Q96LD4 638 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 PLIN2Q99541 437 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 RIC8AQ9NPQ8 531 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 TMEM260Q9NX78 707 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 SERPINB13Q9UIV8 391 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 FRMPD2Q68DX3 1309 aaPredicted RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 PNMA6FA0A0J9YX94 578 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 ATP8B1O43520 1251 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 SHMT1P34896 483 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 STK4Q13043 487 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 GRB10Q13322 594 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 CALCRLQ16602 461 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 MEX3CQ5U5Q3 659 aaKnown RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 JAKMIP3Q5VZ66 844 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 PPP4R3AQ6IN85 833 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 HHIPL2Q6UWX4 724 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 CSGALNACT2Q8N6G5 542 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 ACRBPQ8NEB7 543 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 EHD4Q9H223 541 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 VAT1LQ9HCJ6 419 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 PRDM10Q9NQV6 1147 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 BLOC1S4Q9NUP1 217 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 EXOC1Q9NV70 894 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 CDC23Q9UJX2 597 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 PVALEFA0A1B0GWK0 134 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
PDPN-212ENST00000621990 PDE4DQ08499 809 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 ANKRD40Q6AI12 368 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 FOXR2Q6PJQ5 311 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 DPP8Q6V1X1 898 aaPredicted RBP10.56□□□□□ -0.72
PDPN-212ENST00000621990 FAM114A1Q8IWE2 563 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 KIAA0895Q8NCT3 520 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 CALML4Q96GE6 196 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 PNMA5Q96PV4 448 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 TUBGCP2Q9BSJ2 902 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 JMJD4Q9H9V9 463 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 MAGEC2Q9UBF1 373 aaPredicted RBP10.56□□□□□ -0.72
PDPN-212ENST00000621990 REXO2Q9Y3B8 237 aaKnown RBP10.56□□□□□ -0.72
PDPN-212ENST00000621990 SLC37A4O43826 429 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 PPP1R11O60927 126 aaPredicted RBP10.56□□□□□ -0.72
PDPN-212ENST00000621990 NDUFA10O95299 355 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 PNMA6AP0CW24 399 aaPredicted RBP10.56□□□□□ -0.72
PDPN-212ENST00000621990 TUBB4BP68371 445 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 ASIC1P78348 528 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 PICALMQ13492 652 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 FIGNQ5HY92 759 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 CENPPQ6IPU0 288 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 WDR59Q6PJI9 974 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 SRGAP1Q7Z6B7 1085 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 LRRC47Q8N1G4 583 aaKnown RBP10.56□□□□□ -0.72
PDPN-212ENST00000621990 GOLGA1Q92805 767 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 NUP58Q9BVL2 599 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 PRDM4Q9UKN5 801 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 LUC7L2Q9Y383 392 aaKnown RBP10.56□□□□□ -0.72
PDPN-212ENST00000621990 ARFGEF1Q9Y6D6 1849 aa10.56□□□□□ -0.72
PDPN-212ENST00000621990 MYH7BA7E2Y1 1941 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 RASSF10A6NK89 507 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 NPR1P16066 1061 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 EHHADHQ08426 723 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 TMEM119Q4V9L6 283 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 MIIPQ5JXC2 388 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 GPATCH4Q5T3I0 446 aaKnown RBP10.55□□□□□ -0.72
PDPN-212ENST00000621990 APOBEC3HQ6NTF7 200 aaKnown RBP10.55□□□□□ -0.72
PDPN-212ENST00000621990 TMCO3Q6UWJ1 677 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 ADGRF4Q8IZF3 695 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 PROM2Q8N271 834 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 COA7Q96BR5 231 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 LRWD1Q9UFC0 647 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 EPN1Q9Y6I3 576 aaPredicted RBP10.55□□□□□ -0.72
PDPN-212ENST00000621990 ABCB11O95342 1321 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 A0A1W2PQJ5 194 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 CTAGE9A4FU28 777 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 B4DLN1 442 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 TDP2O95551 362 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 FCER1AP12319 257 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 TXKP42681 527 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 CDK17Q00537 523 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 TMEM266Q2M3C6 531 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 ZNF569Q5MCW4 686 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 CDC42EP5Q6NZY7 148 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 UNC13DQ70J99 1090 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 SV2BQ7L1I2 683 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 CEP112Q8N8E3 955 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 IQCDQ96DY2 449 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 ERGIC2Q96RQ1 377 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 CHP1Q99653 195 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 RAB34Q9BZG1 259 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 ZC3H12CQ9C0D7 883 aaKnown RBP10.55□□□□□ -0.72
PDPN-212ENST00000621990 USP40Q9NVE5 1235 aa10.55□□□□□ -0.72
PDPN-212ENST00000621990 MYMKA6NI61 221 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 ABL1P00519 1130 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 AMPD2Q01433 879 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 LARP4BQ92615 738 aaKnown RBP10.54□□□□□ -0.72
PDPN-212ENST00000621990 CNOT6LQ96LI5 555 aaKnown RBP10.54□□□□□ -0.72
PDPN-212ENST00000621990 MRIQ9BWK5 157 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 UBXN6Q9BZV1 441 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 SEMA6BQ9H3T3 888 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 ZBTB5O15062 677 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms