RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 GMLQ99445 158 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 IRF2BPLQ9H1B7 796 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 CLEC1BQ9P126 229 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 CNOT6Q9ULM6 557 aaKnown RBP7.17□□□□□ -1.26
BRCA1-229ENST00000621897 RWDD3Q9Y3V2 267 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 NPHP3-ACAD11A0A0J9YXS1 232 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 N4BP3O15049 544 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 SRGAP3O43295 1099 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 NUAK1O60285 661 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 GJB6O95452 261 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 ITGAVP06756 1048 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 THBDP07204 575 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 PLS3P13797 630 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 PAMP19021 973 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 PI3P19957 117 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 NCKAP1LP55160 1127 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 OLFML2BQ68BL8 750 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 LDHDQ86WU2 507 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 ZNF227Q86WZ6 799 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 CELF2-AS1Q8N7Q2 184 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 PANK1Q8TE04 598 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 MZB1Q8WU39 189 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 BTN2A2Q8WVV5 523 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 NKX2-4Q9H2Z4 354 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 RXFP1Q9HBX9 757 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 EPB41L4AQ9HCS5 686 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-229ENST00000621897 GULP1Q9UBP9 304 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 KCTD3Q9Y597 815 aa7.16□□□□□ -1.26
BRCA1-229ENST00000621897 A0A1W2PQJ5 194 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 C7orf72A4D263 438 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 NOP56O00567 594 aaKnown RBP7.15□□□□□ -1.26
BRCA1-229ENST00000621897 CYBBP04839 570 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 MAPKAPK2P49137 400 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 ZNF200P98182 395 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-229ENST00000621897 TMEM62Q0P6H9 643 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 NR1I3Q14994 352 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 FXNQ16595 210 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 KRTAP19-4Q3LI73 84 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 SV2CQ496J9 727 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 ZC3H14Q6PJT7 736 aaKnown RBP7.15□□□□□ -1.26
BRCA1-229ENST00000621897 PAQR3Q6TCH7 311 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 ANKS3Q6ZW76 656 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 IGDCC3Q8IVU1 814 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 TMEFF1Q8IYR6 380 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 CRACR2BQ8N4Y2 399 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-229ENST00000621897 MTA3Q9BTC8 594 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 PCDHA5Q9Y5H7 936 aa7.15□□□□□ -1.26
BRCA1-229ENST00000621897 ZC3H12DA2A288 527 aaKnown RBP7.14□□□□□ -1.27
BRCA1-229ENST00000621897 IRS4O14654 1257 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-229ENST00000621897 GLI4P10075 376 aa7.14□□□□□ -1.27
BRCA1-229ENST00000621897 ADAMTS20P59510 1910 aa7.14□□□□□ -1.27
BRCA1-229ENST00000621897 LZTR1Q8N653 840 aa7.14□□□□□ -1.27
BRCA1-229ENST00000621897 NPLOC4Q8TAT6 608 aa7.14□□□□□ -1.27
BRCA1-229ENST00000621897 FRS2Q8WU20 508 aa7.14□□□□□ -1.27
BRCA1-229ENST00000621897 SIGLEC10Q96LC7 697 aa7.14□□□□□ -1.27
BRCA1-229ENST00000621897 CYP26B1Q9NR63 512 aa7.14□□□□□ -1.27
BRCA1-229ENST00000621897 ST7Q9NRC1 585 aa7.14□□□□□ -1.27
BRCA1-229ENST00000621897 IRAK3Q9Y616 596 aa7.14□□□□□ -1.27
BRCA1-229ENST00000621897 F8W031 263 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-229ENST00000621897 ARNTLO00327 626 aa7.13□□□□□ -1.27
BRCA1-229ENST00000621897 SF1Q15637 639 aaKnown RBP7.13□□□□□ -1.27
BRCA1-229ENST00000621897 INF2Q27J81 1249 aa7.13□□□□□ -1.27
BRCA1-229ENST00000621897 FBLN7Q53RD9 439 aa7.13□□□□□ -1.27
BRCA1-229ENST00000621897 AMIGO3Q86WK7 504 aa7.13□□□□□ -1.27
BRCA1-229ENST00000621897 SIAH1Q8IUQ4 282 aa7.13□□□□□ -1.27
BRCA1-229ENST00000621897 IRS2Q9Y4H2 1338 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 KLF4O43474 513 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 FBLN1P23142 703 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 PRR5P85299 388 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 PRSS53Q2L4Q9 553 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 SLC10A6Q3KNW5 377 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 LCE4AQ5TA78 99 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 DPF3Q92784 378 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 MMP19Q99542 508 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 BCAS3Q9H6U6 928 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 LRP2BPQ9P2M1 347 aa7.12□□□□□ -1.27
BRCA1-229ENST00000621897 TMEFF2Q9UIK5 374 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-229ENST00000621897 TRBV23OR9-2A0A075B6M9 112 aa7.11□□□□□ -1.27
BRCA1-229ENST00000621897 ZNF385BQ569K4 471 aa7.11□□□□□ -1.27
BRCA1-229ENST00000621897 CCDC103Q8IW40 242 aa7.11□□□□□ -1.27
BRCA1-229ENST00000621897 NPHS1O60500 1241 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 BUB1BO60566 1050 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-229ENST00000621897 FUCA1P04066 466 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 CAPNS1P04632 268 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 SNRPB2P08579 225 aaKnown RBP7.1□□□□□ -1.27
BRCA1-229ENST00000621897 IGFBP6P24592 240 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-229ENST00000621897 ECI1P42126 302 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 GRIA2P42262 883 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 DDR2Q16832 855 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 NAALADL2Q58DX5 795 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 EEPD1Q7L9B9 569 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 FAM129CQ86XR2 697 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 KREMEN2Q8NCW0 462 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 PLEKHO2Q8TD55 490 aa7.1□□□□□ -1.27
BRCA1-229ENST00000621897 DACT3Q96B18 629 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-229ENST00000621897 DBR1Q9UK59 544 aaKnown RBP7.1□□□□□ -1.27
BRCA1-229ENST00000621897 R3HCC1Q9Y3T6 440 aaKnown RBP7.1□□□□□ -1.27
BRCA1-229ENST00000621897 RFXAPO00287 272 aa7.09□□□□□ -1.27
BRCA1-229ENST00000621897 SCG5P05408 212 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms