RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 FGFR1OP2Q9NVK5 253 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 RBMX2Q9Y388 322 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 ABCC11Q96J66 1382 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 GAS8O95995 478 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 PARP1P09874 1014 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 NDUFA10O95299 355 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 PANX2Q96RD6 677 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 PPARGC1AQ9UBK2 798 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 TACC3Q9Y6A5 838 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 PRPHP41219 470 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 PSEN1P49768 467 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 EIF2B2P49770 351 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 TBL3Q12788 808 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 RESTQ13127 1097 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 UBL4BQ8N7F7 174 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 ZNF280CQ8ND82 737 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 PAGE5Q96GU1 130 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 ADGRG1Q9Y653 693 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 EEF1GP26641 437 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 ZNF211Q13398 564 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 DDX42Q86XP3 938 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 CTAGE3PQ8IX95 158 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 RDH13Q8NBN7 331 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 CNBD2Q96M20 576 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 SH3BP1Q9Y3L3 701 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 ATP6V1G2O95670 118 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 IFIT1BQ5T764 474 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 DIS3L2Q8IYB7 885 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 LLPHQ9BRT6 129 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 MAPK13O15264 365 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 IL9RQ01113 521 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 CUL4AQ13619 759 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 HSP90AA5PQ58FG0 334 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 ATL3Q6DD88 541 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 XAGE3Q8WTP9 111 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 GFM2Q969S9 779 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 KLHL25Q9H0H3 589 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 CYP4F11Q9HBI6 524 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 PNMA2Q9UL42 364 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 DUSP10Q9Y6W6 482 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 TROVE2P10155 538 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 CLUL1Q15846 466 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 TRMT10CQ7L0Y3 403 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 SYMPKQ92797 1274 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 ATP5DP30049 168 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 SLC39A6Q13433 755 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 TCP11X2Q5H9J9 407 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 TTC38Q5R3I4 469 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 PDXDC1Q6P996 788 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 TRIM56Q9BRZ2 755 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 VCPKMTQ9H867 229 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 TBCAO75347 108 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 KYNUQ16719 465 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 TRIM11Q96F44 468 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 MPP4Q96JB8 637 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 MIS12Q9H081 205 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 AMFRQ9UKV5 643 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 MLH1P40692 756 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 DR1Q01658 176 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 ARHGAP24Q8N264 748 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 DNAJC9Q8WXX5 260 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 Q9H521 79 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 RPAP1Q9BWH6 1393 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 HMGB1P1B2RPK0 211 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 BTBD18B2RXH4 712 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 STK10O94804 968 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 CHN1P15882 459 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 NAPAP54920 295 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 IL1RL1Q01638 556 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 CLMNQ96JQ2 1002 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 GPR101Q96P66 508 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 SAP30BPQ9UHR5 308 aaKnown RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 SYNJ1O43426 1573 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 OATP04181 439 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 CCDC159P0C7I6 412 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 FMR1Q06787 632 aaKnown RBP eCLIP5.49□□□□□ -1.531e-6■■■■□ 25.4
VPS13D-214ENST00000620676 SLC20A2Q08357 652 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 C6orf118Q5T5N4 469 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 FBXO31Q5XUX0 539 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 CCDC51Q96ER9 411 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 C9orf84Q5VXU9 1444 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 MAP3K19Q56UN5 1328 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CALM1P0DP23 149 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CALM2P0DP24 149 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CALM3P0DP25 149 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ETS2P15036 469 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 IFIT5Q13325 482 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 TRIM14Q14142 442 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 C1orf146Q5VVC0 180 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 TRIML2Q8N7C3 387 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 PPWD1Q96BP3 646 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 NDEL1Q9GZM8 345 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 RCOR1Q9UKL0 485 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 NOP56O00567 594 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 TARSP26639 723 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ALDH18A1P54886 795 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CCNI2Q6ZMN8 369 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 DTNBP1Q96EV8 351 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms