RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 HVCN1Q96D96 273 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 OSBPL1AQ9BXW6 950 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 SAR1BQ9Y6B6 198 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 M0R2C6 588 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 GSTA1P08263 222 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 VIMP08670 466 aaKnown RBP11.47□□□□□ -0.57
VPS11-207ENST00000620429 IFIT1P09914 478 aaKnown RBP11.47□□□□□ -0.57
VPS11-207ENST00000620429 HMGB2P26583 209 aaKnown RBP11.47□□□□□ -0.57
VPS11-207ENST00000620429 ALDH3A1P30838 453 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 DEUP1Q05D60 604 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 TEKT4Q8WW24 435 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 YIPF2Q9BWQ6 316 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 HPS5Q9UPZ3 1129 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 UBR2Q8IWV8 1755 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 A0A1B0GVG6 124 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 LRRD1A4D1F6 860 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 GMNCA6NCL1 334 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 DIAPH2O60879 1101 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 ABL1P00519 1130 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 CCND1P24385 295 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 ZNF268Q14587 947 aaPredicted RBP11.47□□□□□ -0.57
VPS11-207ENST00000620429 IQCEQ6IPM2 695 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 SHC4Q6S5L8 630 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 TSEN2Q8NCE0 465 aaKnown RBP11.47□□□□□ -0.57
VPS11-207ENST00000620429 ZIM3Q96PE6 472 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 SLC4A9Q96Q91 983 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 PHF24Q9UPV7 400 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 LEMD3Q9Y2U8 911 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 L3MBTL1Q9Y468 752 aa11.47□□□□□ -0.57
VPS11-207ENST00000620429 A0A1B0GTH6 734 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 DPPA5A6NC42 116 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 CFAP73A6NFT4 308 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 CREB3O43889 395 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 TNFRSF8P28908 595 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 BYSLQ13895 437 aaKnown RBP11.46□□□□□ -0.57
VPS11-207ENST00000620429 LBRQ14739 615 aaKnown RBP11.46□□□□□ -0.57
VPS11-207ENST00000620429 PPP1R7Q15435 360 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 IMMTQ16891 758 aaKnown RBP11.46□□□□□ -0.57
VPS11-207ENST00000620429 SGSM1Q2NKQ1 1148 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 AGAP11Q8TF27 550 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 FAM89AQ96GI7 184 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 SEC16BQ96JE7 1060 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 AIFM3Q96NN9 605 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 TMEM165Q9HC07 324 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 SUN2Q9UH99 717 aa11.46□□□□□ -0.57
VPS11-207ENST00000620429 MFAP3LO75121 409 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 GNAQP50148 359 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 SCNN1BP51168 640 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 KIAA0753Q2KHM9 967 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 PPFIBP1Q86W92 1011 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 TMTC1Q8IUR5 882 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 CACNA2D3Q8IZS8 1091 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 TMTC2Q8N394 836 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 FBXL16Q8N461 479 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 MMGT1Q8N4V1 131 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 ACRBPQ8NEB7 543 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 OSBP2Q969R2 916 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 TRIM7Q9C029 511 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 ZWILCHQ9H900 591 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 HPSEQ9Y251 543 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 PCDHA5Q9Y5H7 936 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 CHD4Q14839 1912 aa11.46□□□□□ -0.58
VPS11-207ENST00000620429 HMGB1P1B2RPK0 211 aaPredicted RBP11.45□□□□□ -0.58
VPS11-207ENST00000620429 ATP6V1G1O75348 118 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 ITIH3Q06033 890 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 PDE4BQ07343 736 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 PAPPAQ13219 1627 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 HLFQ16534 295 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 WASHC4Q2M389 1173 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 CCDC102BQ68D86 513 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 KCTD16Q68DU8 428 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 MAATS1Q7Z4T9 603 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 RALYLQ86SE5 291 aaKnown RBP11.45□□□□□ -0.58
VPS11-207ENST00000620429 METTL16Q86W50 562 aaKnown RBP11.45□□□□□ -0.58
VPS11-207ENST00000620429 IQCKQ8N0W5 287 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 ARFGAP2Q8N6H7 521 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 KCNMB3Q9NPA1 279 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 C2CD2Q9Y426 696 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 TRAPPC3O43617 180 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 KIF5BP33176 963 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 MAGEA10P43363 369 aaPredicted RBP11.45□□□□□ -0.58
VPS11-207ENST00000620429 MRPS35P82673 323 aaKnown RBP11.45□□□□□ -0.58
VPS11-207ENST00000620429 RBL2Q08999 1139 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 ITGB3BPQ13352 177 aaPredicted RBP11.45□□□□□ -0.58
VPS11-207ENST00000620429 LONRF3Q496Y0 759 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 PABPC1LQ4VXU2 614 aaKnown RBP11.45□□□□□ -0.58
VPS11-207ENST00000620429 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 DZIP3Q86Y13 1208 aaKnown RBP11.45□□□□□ -0.58
VPS11-207ENST00000620429 CNGA4Q8IV77 575 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 FOXP4Q8IVH2 680 aaPredicted RBP11.45□□□□□ -0.58
VPS11-207ENST00000620429 CCDC63Q8NA47 563 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 ENOX1Q8TC92 643 aaKnown RBP11.45□□□□□ -0.58
VPS11-207ENST00000620429 ISCA1Q9BUE6 129 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 ZNF510Q9Y2H8 683 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 TJP1Q07157 1748 aa11.45□□□□□ -0.58
VPS11-207ENST00000620429 PPP6R2O75170 966 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 CDC27P30260 824 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 PBX1P40424 430 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 MXRA7P84157 204 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms