RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 TRAPPC11Q7Z392 1133 aa15.24■□□□□ 0.03
CNTNAP3B-215ENST00000619138 NHEJ1Q9H9Q4 299 aaPredicted RBP15.24■□□□□ 0.03
CNTNAP3B-215ENST00000619138 FAM217BQ9NTX9 383 aaPredicted RBP15.24■□□□□ 0.03
CNTNAP3B-215ENST00000619138 FAM184BQ9ULE4 1060 aa15.24■□□□□ 0.03
CNTNAP3B-215ENST00000619138 G3V3G9 751 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 FMNL1O95466 1100 aaPredicted RBP15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 PEX19P40855 299 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 SPAG1Q07617 926 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 MAP3K12Q12852 859 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 DCAF8Q5TAQ9 597 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 IFNL3Q8IZI9 196 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 ZNF654Q8IZM8 581 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 HPS3Q969F9 1004 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 IFIH1Q9BYX4 1025 aaKnown RBP15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 NLRC4Q9NPP4 1024 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 NUP188Q5SRE5 1749 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 CLNS1AP54105 237 aaKnown RBP15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 FANCBQ8NB91 859 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 OR2W6PQ8NHA6 318 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 CEP83Q9Y592 693 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 PLEKHA8P1O95397 391 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 NTRK3Q16288 839 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 RPAINQ86UA6 219 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 CCDC51Q96ER9 411 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 TRIM31Q9BZY9 425 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 TMX4Q9H1E5 349 aaPredicted RBP15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 BAIAP2L1Q9UHR4 511 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 ODF2LQ9ULJ1 636 aa15.23■□□□□ 0.03
CNTNAP3B-215ENST00000619138 SF3B3Q15393 1217 aaKnown RBP15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 CACNA2D4Q7Z3S7 1137 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 DEFB132Q7Z7B7 95 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 RNPC3Q96LT9 517 aaKnown RBP15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 NOC4LQ9BVI4 516 aaKnown RBP15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 NACAP1Q9BZK3 213 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 PPP1R1BQ9UD71 204 aaPredicted RBP15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 TUBGCP6Q96RT7 1819 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 KLRK1P26718 216 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 WDR93Q6P2C0 686 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 B4GALNT4Q76KP1 1039 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 COL23A1Q86Y22 540 aaPredicted RBP15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 MMP10P09238 476 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 UBA7P41226 1012 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 SARSP49591 514 aaKnown RBP15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 TUBB4BP68371 445 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 HDLBPQ00341 1268 aaKnown RBP15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 AMPD2Q01433 879 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 ZIM3Q96PE6 472 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 CCDC113Q9H0I3 377 aa15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 BSDC1Q9NW68 430 aaPredicted RBP15.22■□□□□ 0.03
CNTNAP3B-215ENST00000619138 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 FTCDO95954 541 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 RPN1P04843 607 aaKnown RBP15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 CAPN6Q9Y6Q1 641 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 RIMBP2O15034 1052 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 CLSTN1O94985 981 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 IFNAR1P17181 557 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 ADRA2BP18089 450 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 CARSP49589 748 aaKnown RBP15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 PMS1P54277 932 aaKnown RBP15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 RASSF7Q02833 373 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 KSR1Q8IVT5 923 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 CRACR2BQ8N4Y2 399 aaPredicted RBP15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 GSDMAQ96QA5 445 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 KRT12Q99456 494 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 RIC1Q4ADV7 1423 aa15.21■□□□□ 0.03
CNTNAP3B-215ENST00000619138 RPS6KA5O75582 802 aa15.21■□□□□ 0.02
CNTNAP3B-215ENST00000619138 ADD2P35612 726 aa15.21■□□□□ 0.02
CNTNAP3B-215ENST00000619138 AKNAD1Q5T1N1 836 aa15.21■□□□□ 0.02
CNTNAP3B-215ENST00000619138 MICALCLQ6ZW33 695 aa15.21■□□□□ 0.02
CNTNAP3B-215ENST00000619138 APTXQ7Z2E3 356 aaKnown RBP15.21■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PNMA8AQ86V59 439 aaPredicted RBP15.21■□□□□ 0.02
CNTNAP3B-215ENST00000619138 MB21D1Q8N884 522 aa15.21■□□□□ 0.02
CNTNAP3B-215ENST00000619138 VGLL2Q8N8G2 317 aa15.21■□□□□ 0.02
CNTNAP3B-215ENST00000619138 EHBP1Q8NDI1 1231 aa15.21■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PDHBP11177 359 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 RRAGAQ7L523 313 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TLDC2A0PJX2 215 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PSMA7O14818 248 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 HEXIM1O94992 359 aaKnown RBP15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CYP7A1P22680 504 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 ASIC1P78348 528 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 SPATA4Q8NEY3 305 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TUBGCP2Q9BSJ2 902 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 MAGEA1P43355 309 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TTMPQ5BVD1 217 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 UBLCP1Q8WVY7 318 aaPredicted RBP15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 ALS2CR12Q96Q35 445 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 MYO1AQ9UBC5 1043 aa15.2■□□□□ 0.02
CNTNAP3B-215ENST00000619138 GOLGA8KD6RF30 607 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 FAM153BP0C7A2 387 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CDC25CP30307 473 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 HIBADHP31937 336 aaKnown RBP15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 FAM153CQ494X1 144 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CCDC40Q4G0X9 1142 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 IFIT1BQ5T764 474 aaKnown RBP15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CDKAL1Q5VV42 579 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 UHMK1Q8TAS1 419 aaKnown RBP15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CEP89Q96ST8 783 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 KANSL2Q9H9L4 492 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms