RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 LSP1P33241 339 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 MRPS25P82663 173 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 AMPD2Q01433 879 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 CAGE1Q8TC20 777 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 RBM17Q96I25 401 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 LEMD3Q9Y2U8 911 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 C6orf229H3BNL8 230 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 RAB27AP51159 221 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 PLCB4Q15147 1175 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 SPRED3Q2MJR0 410 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 MYSM1Q5VVJ2 828 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 CAPRIN2Q6IMN6 1127 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 TUBE1Q9UJT0 475 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 CACNA1SQ13698 1873 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 TEX33O43247 280 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 BUB1BO60566 1050 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 LDHBP07195 334 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 IARSP41252 1262 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 APBA1Q02410 837 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 CCNI2Q6ZMN8 369 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 COL23A1Q86Y22 540 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 CCDC50Q8IVM0 306 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 NSMCE1Q8WV22 266 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 SLC39A2Q9NP94 309 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 TRIM10Q9UDY6 481 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 GUCA1BQ9UMX6 200 aa17.59■□□□□ 0.41
SEMA3B-214ENST00000619119 BAZ2AQ9UIF9 1905 aaKnown RBP17.58■□□□□ 0.41
SEMA3B-214ENST00000619119 UBR3Q6ZT12 1888 aa17.58■□□□□ 0.41
SEMA3B-214ENST00000619119 KIF28PB7ZC32 967 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 SLC8A1P32418 973 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 CRY2Q49AN0 593 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 YTHDF3Q7Z739 585 aaKnown RBP17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 RASSF8Q8NHQ8 419 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 PIK3R5Q8WYR1 880 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 TNKSO95271 1327 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 RIMBP2O15034 1052 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 OPA1O60313 960 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 LIFRP42702 1097 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 RASGRP2Q7LDG7 609 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 ZNF804AQ7Z570 1209 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 SGMS1Q86VZ5 419 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 ESR2Q92731 530 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 STAMBPL1Q96FJ0 436 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 PANX2Q96RD6 677 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 CRNKL1Q9BZJ0 848 aaKnown RBP17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 DCP1AQ9NPI6 582 aaPredicted RBP17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 SAMSN1Q9NSI8 373 aaKnown RBP17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 BAIAP2L1Q9UHR4 511 aa17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 G3BP2Q9UN86 482 aaKnown RBP17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 TTF2Q9UNY4 1162 aaKnown RBP17.58■□□□□ 0.4
SEMA3B-214ENST00000619119 IRS2Q9Y4H2 1338 aa17.57■□□□□ 0.4
SEMA3B-214ENST00000619119 MYH13Q9UKX3 1938 aa17.57■□□□□ 0.4
SEMA3B-214ENST00000619119 PYGLP06737 847 aa17.57■□□□□ 0.4
SEMA3B-214ENST00000619119 SKOR1P84550 965 aa17.57■□□□□ 0.4
SEMA3B-214ENST00000619119 FMR1Q06787 632 aaKnown RBP eCLIP17.57■□□□□ 0.4
SEMA3B-214ENST00000619119 FAM47AQ5JRC9 791 aa17.57■□□□□ 0.4
SEMA3B-214ENST00000619119 RNPC3Q96LT9 517 aaKnown RBP17.57■□□□□ 0.4
SEMA3B-214ENST00000619119 MCM9Q9NXL9 1143 aa17.57■□□□□ 0.4
SEMA3B-214ENST00000619119 GGA1Q9UJY5 639 aa17.57■□□□□ 0.4
SEMA3B-214ENST00000619119 SPECC1Q5M775 1068 aa17.57■□□□□ 0.4
SEMA3B-214ENST00000619119 NMT2O60551 498 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 CLSTN1O94985 981 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 MAB21L3Q8N8X9 362 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 CCT8L2Q96SF2 557 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 SLF1Q9BQI6 1058 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 EPN3Q9H201 632 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 POLLQ9UGP5 575 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 PCDHA5Q9Y5H7 936 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 CDKL5O76039 1030 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 USP17L8P0C7I0 530 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 GUCY1A2P33402 732 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 PAIP2Q9BPZ3 127 aaKnown RBP17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 KIF4AO95239 1232 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 NTRK3Q16288 839 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 RTN1Q16799 776 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 NLRP14Q86W24 1093 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 RPUSD2Q8IZ73 545 aaKnown RBP17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 CD209Q9NNX6 404 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 FAM184BQ9ULE4 1060 aa17.56■□□□□ 0.4
SEMA3B-214ENST00000619119 hCG_1642624A0A1W2PR95 340 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 E7EVH7 732 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 C2orf54Q08AI8 447 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 ZNF772Q68DY9 489 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 BZW1Q7L1Q6 419 aaKnown RBP17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 ZNF654Q8IZM8 581 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 MYCBPAPQ8TBZ2 947 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 FOXN1O15353 648 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 BMP6P22004 513 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 CMA1P23946 247 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 TBC1D25Q3MII6 688 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 KRT40Q6A162 431 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 OR8K1Q8NGG5 319 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 WDR66Q8TBY9 1149 aa17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 SH3RF3Q8TEJ3 882 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-214ENST00000619119 DNM1LO00429 736 aa17.54■□□□□ 0.4
SEMA3B-214ENST00000619119 YEATS4O95619 227 aa17.54■□□□□ 0.4
SEMA3B-214ENST00000619119 ATP1A1P05023 1023 aaKnown RBP17.54■□□□□ 0.4
SEMA3B-214ENST00000619119 CASP14P31944 242 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms