RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 RPGRQ92834 1020 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 TRIM4Q9C037 500 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 DBR1Q9UK59 544 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 COL15A1P39059 1388 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 KRT4P19013 534 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 ARHGDIAP52565 204 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 TRIML2Q8N7C3 387 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 ERBB3P21860 1342 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 GOLGA8AA7E2F4 631 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 KLRK1P26718 216 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 GGCXP38435 758 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 IRAK1P51617 712 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 ZNF449Q6P9G9 518 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 MAEAQ7L5Y9 396 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 KLHL7Q8IXQ5 586 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 CCDC28BQ9BUN5 200 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 LRRIQ3A6PVS8 624 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 USP17L12C9JPN9 530 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 USP17L21D6R901 530 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 RANBP6O60518 1105 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 PLEKP08567 350 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 EML3Q32P44 896 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 ANKRD40Q6AI12 368 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 CARD9Q9H257 536 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 KRT9P35527 623 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 IARSP41252 1262 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 ATN1P54259 1190 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 BNC1Q01954 994 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 ITIH3Q06033 890 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 CUL4BQ13620 913 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 CC2D1AQ6P1N0 951 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 CFAP61Q8NHU2 1237 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 MRFAP1L1Q96HT8 127 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 PRR23AA6NEV1 266 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 EYA2O00167 538 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 E2F6O75461 281 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 H2AFXP16104 143 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 TMOD1P28289 359 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 SERPINB10P48595 397 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 VSNL1P62760 191 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 KIF23Q02241 960 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 KRT72Q14CN4 511 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 BEND6Q5SZJ8 279 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 SUGP1Q8IWZ8 645 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 CRACR2BQ8N4Y2 399 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 KAT14Q9H8E8 782 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 TXLNGQ9NUQ3 528 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 TRMT112Q9UI30 125 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 KANK1Q14678 1352 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 RFC1P35251 1148 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 CHMP4BP1P59074 171 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 BIRC3Q13489 604 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SRBD1Q8N5C6 995 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 TC2NQ8N9U0 490 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 CFAP36Q96G28 342 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SCAF8Q9UPN6 1271 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 GAPVD1Q14C86 1478 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 H0YC42 278 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 ZBTB39O15060 712 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TCP1P17987 556 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 TPD52P55327 224 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 EPC2Q52LR7 807 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 PRR23CQ6ZRP0 262 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TEX11Q8IYF3 940 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 AFAP1L2Q8N4X5 818 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 OSBPL5Q9H0X9 879 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 RNF41Q9H4P4 317 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 SUFUQ9UMX1 484 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 KAT6BQ8WYB5 2073 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 A0A1B0GW55 424 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SMIM23A6NLE4 172 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 RPSAP08865 295 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 DUX4L2P0CJ85 424 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 DUX4L3P0CJ86 424 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 DUX4L4P0CJ87 422 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 DUX4L5P0CJ88 424 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 DUX4L6P0CJ89 424 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 DUX4L7P0CJ90 424 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 NME8Q8N427 588 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TMOD4Q9NZQ9 345 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 DUX4Q9UBX2 424 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 L1RE1Q9UN81 338 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 RBM20Q5T481 1227 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 NXNQ6DKJ4 435 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SLC44A5Q8NCS7 719 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 MAGEC3Q8TD91 643 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 NLRP7Q8WX94 980 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 CD248Q9HCU0 757 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 HACD3Q9P035 362 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 MOCS3O95396 460 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TBC1D8BQ0IIM8 1120 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SLC30A9Q6PML9 568 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 PAF1Q8N7H5 531 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 LRRC1Q9BTT6 524 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 CXorf56Q9H5V9 222 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TMEM260Q9NX78 707 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 EPN1Q9Y6I3 576 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 EXOC5O00471 708 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 PLEKHA8P1O95397 391 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms