RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 CRY2Q49AN0 593 aa21.55■■□□□ 1.04
PCDHGB3-202ENST00000618934 BEND6Q5SZJ8 279 aaPredicted RBP21.55■■□□□ 1.04
PCDHGB3-202ENST00000618934 MSANTD4Q8NCY6 345 aa21.55■■□□□ 1.04
PCDHGB3-202ENST00000618934 NUDT12Q9BQG2 462 aa21.55■■□□□ 1.04
PCDHGB3-202ENST00000618934 CUEDC2Q9H467 287 aa21.55■■□□□ 1.04
PCDHGB3-202ENST00000618934 RIOX1Q9H6W3 641 aa21.55■■□□□ 1.04
PCDHGB3-202ENST00000618934 MYO6Q9UM54 1294 aa21.55■■□□□ 1.04
PCDHGB3-202ENST00000618934 LY75O60449 1722 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 NOVP48745 357 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 ST5P78524 1137 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 MCM6Q14566 821 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 TBC1D16Q8TBP0 767 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 PNMA5Q96PV4 448 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 MTMR9Q96QG7 549 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 LACRTQ9GZZ8 138 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 DUSP10Q9Y6W6 482 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 MYMKA6NI61 221 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 H3BQF6 201 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 ATP2B4P23634 1241 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 BRD3Q15059 726 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 FNBP4Q8N3X1 1017 aaPredicted RBP21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 GJA10Q969M2 543 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 ABCB6Q9NP58 842 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 MYO1AQ9UBC5 1043 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 USP21Q9UK80 565 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 RAB21Q9UL25 225 aa21.54■■□□□ 1.04
PCDHGB3-202ENST00000618934 SRGAP2O75044 1071 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 GYS1P13807 737 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 AKR1B1P15121 316 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 TRIM21P19474 475 aaKnown RBP21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 VSNL1P62760 191 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 MEA1Q16626 185 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 FAM163AQ96GL9 167 aaPredicted RBP21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 GPCPD1Q9NPB8 672 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 DAGLAQ9Y4D2 1042 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 GAKO14976 1311 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 POTEMA6NI47 508 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 F8W031 263 aaPredicted RBP21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 MAP2K7O14733 419 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 ATP1A1P05023 1023 aaKnown RBP21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 SERPINB2P05120 415 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 MTIF2P46199 727 aaKnown RBP21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 DYMQ7RTS9 669 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 GPIHBP1Q8IV16 184 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 CERKQ8TCT0 537 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 MTMR4Q9NYA4 1195 aa21.53■■□□□ 1.04
PCDHGB3-202ENST00000618934 GTF2IP78347 998 aa21.52■■□□□ 1.04
PCDHGB3-202ENST00000618934 WHAMMP3Q1A5X7 153 aa21.52■■□□□ 1.04
PCDHGB3-202ENST00000618934 CCDC122Q5T0U0 273 aa21.52■■□□□ 1.04
PCDHGB3-202ENST00000618934 KCNK18Q7Z418 384 aa21.52■■□□□ 1.04
PCDHGB3-202ENST00000618934 GLIS3Q8NEA6 775 aa21.52■■□□□ 1.04
PCDHGB3-202ENST00000618934 NOC4LQ9BVI4 516 aaKnown RBP21.52■■□□□ 1.04
PCDHGB3-202ENST00000618934 MAGEF1Q9HAY2 307 aa21.52■■□□□ 1.04
PCDHGB3-202ENST00000618934 DDX4Q9NQI0 724 aaKnown RBP21.52■■□□□ 1.04
PCDHGB3-202ENST00000618934 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.52■■□□□ 1.04
PCDHGB3-202ENST00000618934 CTAGE15A4D2H0 777 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 C6orf229H3BNL8 230 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 PLEKP08567 350 aaPredicted RBP21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 CTAGE8P0CG41 777 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 ERCC3P19447 782 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 CYP2C19P33261 490 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 CYP27A1Q02318 531 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 TUBB2AQ13885 445 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 CALCRLQ16602 461 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 CTAGE6Q86UF2 777 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 CTAGE4Q8IX94 777 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 NOC3LQ8WTT2 800 aaKnown RBP21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 TUBB2BQ9BVA1 445 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 MXD3Q9BW11 206 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 NHEJ1Q9H9Q4 299 aaPredicted RBP21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 RIMBP2O15034 1052 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 EPHB6O15197 1021 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 DPP8Q6V1X1 898 aaPredicted RBP21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 TRAPPC11Q7Z392 1133 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 UIMC1Q96RL1 719 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 HAUS4Q9H6D7 363 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 LRWD1Q9UFC0 647 aa21.51■■□□□ 1.03
PCDHGB3-202ENST00000618934 PPP1R11O60927 126 aaPredicted RBP21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 PLCG2P16885 1265 aa21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 UBE2SQ16763 222 aa21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 TTBK2Q6IQ55 1244 aa21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 CALML4Q96GE6 196 aa21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 PCMTD1Q96MG8 357 aaPredicted RBP21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 BICDL2A1A5D9 508 aa21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 PSMD14O00487 310 aa21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 ZNF263O14978 683 aa21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 SMARCA1P28370 1054 aa21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 ECM1Q16610 540 aa21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 TSR1Q2NL82 804 aaKnown RBP21.5■■□□□ 1.03
PCDHGB3-202ENST00000618934 GABPAQ06546 454 aa21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 SV2BQ7L1I2 683 aa21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 KRT26Q7Z3Y9 468 aa21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 ZSCAN29Q8IWY8 852 aaPredicted RBP21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 HNRNPLLQ8WVV9 542 aaKnown RBP21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 RBM17Q96I25 401 aaKnown RBP21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 RNF216Q9NWF9 866 aaPredicted RBP21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 L1RE1Q9UN81 338 aa21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 ESYT2A0FGR8 921 aa21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 TOM1O60784 492 aa21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 SEMA3FQ13275 785 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms