RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
PTPN9-206ENST00000618819 MAPK13O15264 365 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 YWHAEP62258 255 aaKnown RBP15.74■□□□□ 0.11
PTPN9-206ENST00000618819 OCRLQ01968 901 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 SF3B3Q15393 1217 aaKnown RBP15.74■□□□□ 0.11
PTPN9-206ENST00000618819 KIF19Q2TAC6 998 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 RYBPQ8N488 228 aaPredicted RBP15.74■□□□□ 0.11
PTPN9-206ENST00000618819 ZNF277Q9NRM2 450 aaPredicted RBP15.74■□□□□ 0.11
PTPN9-206ENST00000618819 MOCS3O95396 460 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 H2AFZP0C0S5 128 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 H2AFVQ71UI9 128 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 EXOC4Q96A65 974 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 ZNF653Q96CK0 615 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 KIF9Q9HAQ2 790 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 E2F6O75461 281 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 TMOD1P28289 359 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 TIMM10P62072 90 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 TSPYL6Q8N831 410 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 SLC39A2Q9NP94 309 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 TSC22D4Q9Y3Q8 395 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 CHGBP05060 677 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 SPOUT1Q5T280 376 aaKnown RBP15.73■□□□□ 0.11
PTPN9-206ENST00000618819 NUGGCQ68CJ6 796 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 CATSPER3Q86XQ3 398 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 RNF169Q8NCN4 708 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 CASKIN1Q8WXD9 1431 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 C1orf112Q9NSG2 853 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 PANK4Q9NVE7 773 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 GYG2O15488 501 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 DAB1O75553 588 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 CHRNA2Q15822 529 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 EXT2Q93063 718 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 AZI2Q9H6S1 392 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 A6NJR5 290 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 CFBP00751 764 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 MRPS25P82663 173 aaKnown RBP15.73■□□□□ 0.11
PTPN9-206ENST00000618819 RFX8Q6ZV50 586 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 ZC3H12CQ9C0D7 883 aaKnown RBP15.73■□□□□ 0.11
PTPN9-206ENST00000618819 SNX5Q9Y5X3 404 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 SYNDIG1LA6NDD5 238 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 YWHAHQ04917 246 aaPredicted RBP15.73■□□□□ 0.11
PTPN9-206ENST00000618819 SESTD1Q86VW0 696 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 CPXCR1Q8N123 301 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 CNOT10Q9H9A5 744 aaKnown RBP15.73■□□□□ 0.11
PTPN9-206ENST00000618819 GPHNQ9NQX3 736 aaPredicted RBP15.73■□□□□ 0.11
PTPN9-206ENST00000618819 MRPL28Q13084 256 aaKnown RBP15.73■□□□□ 0.11
PTPN9-206ENST00000618819 SGO2Q562F6 1265 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 C6orf118Q5T5N4 469 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 TRIM67Q6ZTA4 783 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.73■□□□□ 0.11
PTPN9-206ENST00000618819 EIF3CLB5ME19 914 aaKnown RBP15.73■□□□□ 0.11
PTPN9-206ENST00000618819 EIF3CQ99613 913 aaKnown RBP15.73■□□□□ 0.11
PTPN9-206ENST00000618819 TRIM15Q9C019 465 aa15.73■□□□□ 0.11
PTPN9-206ENST00000618819 FTCDO95954 541 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 KITP10721 976 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 PDZD4Q76G19 769 aaPredicted RBP15.72■□□□□ 0.11
PTPN9-206ENST00000618819 SH3GL3Q99963 347 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 COG4Q9H9E3 785 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 ATP8B1O43520 1251 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 RNF207Q6ZRF8 634 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 SYT2Q8N9I0 419 aaPredicted RBP15.72■□□□□ 0.11
PTPN9-206ENST00000618819 GPT2Q8TD30 523 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 NBNO60934 754 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 BASP1P80723 227 aaKnown RBP15.72■□□□□ 0.11
PTPN9-206ENST00000618819 ENAHQ8N8S7 591 aaPredicted RBP15.72■□□□□ 0.11
PTPN9-206ENST00000618819 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.72■□□□□ 0.11
PTPN9-206ENST00000618819 DEPDC1BQ8WUY9 529 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 RBL2Q08999 1139 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 TTC6Q86TZ1 520 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 GPAA1O43292 621 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 METTL13Q8N6R0 699 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 ARMCX3Q9UH62 379 aaPredicted RBP15.72■□□□□ 0.11
PTPN9-206ENST00000618819 K7ENM7 598 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 HMGB2P26583 209 aaKnown RBP15.72■□□□□ 0.11
PTPN9-206ENST00000618819 C1orf146Q5VVC0 180 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 ZBTB40Q9NUA8 1239 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 AATFQ9NY61 560 aaKnown RBP eCLIP15.72■□□□□ 0.11
PTPN9-206ENST00000618819 PHF8Q9UPP1 1060 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 STK24Q9Y6E0 443 aa15.72■□□□□ 0.11
PTPN9-206ENST00000618819 GSPT1P15170 499 aaKnown RBP15.71■□□□□ 0.11
PTPN9-206ENST00000618819 DEUP1Q05D60 604 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 PCGF5Q86SE9 256 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 CLIC6Q96NY7 704 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 STX18Q9P2W9 335 aaKnown RBP15.71■□□□□ 0.11
PTPN9-206ENST00000618819 EXOC1LA0A1B0GW35 172 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 ADALQ6DHV7 355 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 CCDC127Q96BQ5 260 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 MCF2LO15068 1137 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 PDCLQ13371 301 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 DNAAF3Q8N9W5 541 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 ARMC2Q8NEN0 867 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 DEPTORQ8TB45 409 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 CSRNP1Q96S65 589 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 ABCB6Q9NP58 842 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 TLK1Q9UKI8 766 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 STAT2P52630 851 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 CASP8Q14790 479 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 CAPRIN2Q6IMN6 1127 aaKnown RBP15.71■□□□□ 0.11
PTPN9-206ENST00000618819 CCHCR1Q8TD31 782 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 GIPC2Q8TF65 315 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms