RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 SPATA1Q5VX52 437 aa17.1■□□□□ 0.33
CBX5-206ENST00000618078 KLRC4O43908 158 aa17.1■□□□□ 0.33
CBX5-206ENST00000618078 BMP3P12645 472 aa17.1■□□□□ 0.33
CBX5-206ENST00000618078 DALRD3Q5D0E6 543 aaKnown RBP17.1■□□□□ 0.33
CBX5-206ENST00000618078 SYDE2Q5VT97 1194 aa17.1■□□□□ 0.33
CBX5-206ENST00000618078 APTXQ7Z2E3 356 aaKnown RBP17.1■□□□□ 0.33
CBX5-206ENST00000618078 ORC2Q13416 577 aaPredicted RBP17.09■□□□□ 0.33
CBX5-206ENST00000618078 ZNF658Q5TYW1 1059 aaPredicted RBP17.09■□□□□ 0.33
CBX5-206ENST00000618078 CCDC84Q86UT8 332 aaPredicted RBP17.09■□□□□ 0.33
CBX5-206ENST00000618078 AGBL3Q8NEM8 1001 aa17.09■□□□□ 0.33
CBX5-206ENST00000618078 ZBTB21Q9ULJ3 1066 aa17.09■□□□□ 0.33
CBX5-206ENST00000618078 NFKBIEO00221 500 aa17.09■□□□□ 0.33
CBX5-206ENST00000618078 EGFRP00533 1210 aa17.09■□□□□ 0.33
CBX5-206ENST00000618078 TGFB2P61812 414 aa17.09■□□□□ 0.33
CBX5-206ENST00000618078 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
CBX5-206ENST00000618078 KMT5BQ4FZB7 885 aa17.09■□□□□ 0.33
CBX5-206ENST00000618078 CCDC150Q8NCX0 1101 aa17.09■□□□□ 0.33
CBX5-206ENST00000618078 C16orf45Q96MC5 204 aaPredicted RBP17.09■□□□□ 0.33
CBX5-206ENST00000618078 NUDT12Q9BQG2 462 aa17.09■□□□□ 0.33
CBX5-206ENST00000618078 TAOK3Q9H2K8 898 aa17.09■□□□□ 0.33
CBX5-206ENST00000618078 WNT10BO00744 389 aa17.08■□□□□ 0.33
CBX5-206ENST00000618078 SFPQP23246 707 aaKnown RBP eCLIP17.08■□□□□ 0.33
CBX5-206ENST00000618078 PRCPP42785 496 aa17.08■□□□□ 0.33
CBX5-206ENST00000618078 GRB10Q13322 594 aa17.08■□□□□ 0.33
CBX5-206ENST00000618078 HAS1Q92839 578 aa17.08■□□□□ 0.33
CBX5-206ENST00000618078 LRWD1Q9UFC0 647 aa17.08■□□□□ 0.33
CBX5-206ENST00000618078 DDX25Q9UHL0 483 aaKnown RBP17.08■□□□□ 0.33
CBX5-206ENST00000618078 MEIS2O14770 477 aa17.08■□□□□ 0.32
CBX5-206ENST00000618078 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
CBX5-206ENST00000618078 CDKAL1Q5VV42 579 aa17.08■□□□□ 0.32
CBX5-206ENST00000618078 CIAPIN1Q6FI81 312 aa17.08■□□□□ 0.32
CBX5-206ENST00000618078 ZBED3Q96IU2 234 aaPredicted RBP17.08■□□□□ 0.32
CBX5-206ENST00000618078 PNMA5Q96PV4 448 aa17.08■□□□□ 0.32
CBX5-206ENST00000618078 TEX33O43247 280 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 ZYXQ15942 572 aaKnown RBP17.07■□□□□ 0.32
CBX5-206ENST00000618078 CT47A1Q5JQC4 288 aaPredicted RBP17.07■□□□□ 0.32
CBX5-206ENST00000618078 PPP4R3AQ6IN85 833 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 NELFBQ8WX92 580 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 ANO3Q9BYT9 981 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 GLIS2Q9BZE0 524 aaPredicted RBP17.07■□□□□ 0.32
CBX5-206ENST00000618078 VPS33BQ9H267 617 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 PAK1Q13153 545 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 FBXO11Q86XK2 927 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 MTMR14Q8NCE2 650 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 AMNQ9BXJ7 453 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 TRMT1Q9NXH9 659 aaKnown RBP17.07■□□□□ 0.32
CBX5-206ENST00000618078 PGAP2Q9UHJ9 254 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 PRR12Q9ULL5 1215 aa17.07■□□□□ 0.32
CBX5-206ENST00000618078 TRIM49BA6NDI0 452 aa17.06■□□□□ 0.32
CBX5-206ENST00000618078 POLD1P28340 1107 aa17.06■□□□□ 0.32
CBX5-206ENST00000618078 FAM83BQ5T0W9 1011 aa17.06■□□□□ 0.32
CBX5-206ENST00000618078 TRIM9Q9C026 710 aa17.06■□□□□ 0.32
CBX5-206ENST00000618078 BLOC1S4Q9NUP1 217 aa17.06■□□□□ 0.32
CBX5-206ENST00000618078 A0A1B0GTH6 734 aa17.06■□□□□ 0.32
CBX5-206ENST00000618078 OPLAHO14841 1288 aa17.06■□□□□ 0.32
CBX5-206ENST00000618078 MTFR1LQ9H019 292 aa17.06■□□□□ 0.32
CBX5-206ENST00000618078 ARHGEF10LQ9HCE6 1279 aa17.06■□□□□ 0.32
CBX5-206ENST00000618078 MYOZ2Q9NPC6 264 aa17.06■□□□□ 0.32
CBX5-206ENST00000618078 PMS1P54277 932 aaKnown RBP17.05■□□□□ 0.32
CBX5-206ENST00000618078 NR1I3Q14994 352 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 TPD52L1Q16890 204 aaPredicted RBP17.05■□□□□ 0.32
CBX5-206ENST00000618078 TMEM266Q2M3C6 531 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 BTNL9Q6UXG8 535 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 KCNK18Q7Z418 384 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 CALML4Q96GE6 196 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 RWDD2AQ9UIY3 292 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 TMX2Q9Y320 296 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 KCNB1Q14721 858 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 R3HDM1Q15032 1099 aaKnown RBP17.05■□□□□ 0.32
CBX5-206ENST00000618078 ECM1Q16610 540 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 ADSSL1Q8N142 457 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 SNX29Q8TEQ0 813 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 CUEDC2Q9H467 287 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 BCS1LQ9Y276 419 aa17.05■□□□□ 0.32
CBX5-206ENST00000618078 UQCRHLA0A096LP55 91 aa17.04■□□□□ 0.32
CBX5-206ENST00000618078 RHOBTB3O94955 611 aa17.04■□□□□ 0.32
CBX5-206ENST00000618078 UQCRHP07919 91 aa17.04■□□□□ 0.32
CBX5-206ENST00000618078 HOXA13P31271 388 aaPredicted RBP17.04■□□□□ 0.32
CBX5-206ENST00000618078 ASIC1P78348 528 aa17.04■□□□□ 0.32
CBX5-206ENST00000618078 RASSF7Q02833 373 aa17.04■□□□□ 0.32
CBX5-206ENST00000618078 TBX2Q13207 712 aaPredicted RBP17.04■□□□□ 0.32
CBX5-206ENST00000618078 MCM6Q14566 821 aa17.04■□□□□ 0.32
CBX5-206ENST00000618078 FKBP1CQ5VVH2 108 aa17.04■□□□□ 0.32
CBX5-206ENST00000618078 HPS3Q969F9 1004 aa17.04■□□□□ 0.32
CBX5-206ENST00000618078 ASTN2O75129 1339 aaPredicted RBP17.04■□□□□ 0.32
CBX5-206ENST00000618078 E4F1Q66K89 784 aaPredicted RBP17.04■□□□□ 0.32
CBX5-206ENST00000618078 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
CBX5-206ENST00000618078 FAM83AQ86UY5 434 aa17.04■□□□□ 0.32
CBX5-206ENST00000618078 ADD3Q9UEY8 706 aaKnown RBP17.04■□□□□ 0.32
CBX5-206ENST00000618078 CCT6AP40227 531 aaKnown RBP17.03■□□□□ 0.32
CBX5-206ENST00000618078 PRELPP51888 382 aa17.03■□□□□ 0.32
CBX5-206ENST00000618078 STAT2P52630 851 aa17.03■□□□□ 0.32
CBX5-206ENST00000618078 CCAR2Q8N163 923 aaKnown RBP17.03■□□□□ 0.32
CBX5-206ENST00000618078 GIMAP8Q8ND71 665 aaPredicted RBP17.03■□□□□ 0.32
CBX5-206ENST00000618078 MAGEF1Q9HAY2 307 aa17.03■□□□□ 0.32
CBX5-206ENST00000618078 ATAD5Q96QE3 1844 aa17.03■□□□□ 0.32
CBX5-206ENST00000618078 MYL1P05976 194 aa17.03■□□□□ 0.32
CBX5-206ENST00000618078 FCER1AP12319 257 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 408.9 ms