RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 BTNL9Q6UXG8 535 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 FBXO11Q86XK2 927 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 LRRC8AQ8IWT6 810 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 MMTAG2Q9BU76 263 aaKnown RBP19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 CD2APQ9Y5K6 639 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 STX17P56962 302 aa19.56■□□□□ 0.72
PCDHGC3-205ENST00000617641 PPP4R3AQ6IN85 833 aa19.56■□□□□ 0.72
PCDHGC3-205ENST00000617641 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.56■□□□□ 0.72
PCDHGC3-205ENST00000617641 NAP1L5Q96NT1 182 aaPredicted RBP19.56■□□□□ 0.72
PCDHGC3-205ENST00000617641 GLT8D2Q9H1C3 349 aa19.56■□□□□ 0.72
PCDHGC3-205ENST00000617641 ZNF18P17022 549 aa19.56■□□□□ 0.72
PCDHGC3-205ENST00000617641 SAMSN1Q9NSI8 373 aaKnown RBP19.56■□□□□ 0.72
PCDHGC3-205ENST00000617641 DDX25Q9UHL0 483 aaKnown RBP19.56■□□□□ 0.72
PCDHGC3-205ENST00000617641 PRR12Q9ULL5 1215 aa19.56■□□□□ 0.72
PCDHGC3-205ENST00000617641 SYNRGQ9UMZ2 1314 aa19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 CAP2P40123 477 aa19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 PRELPP51888 382 aa19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 ZNF280AP59817 542 aaPredicted RBP19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 RASA3Q14644 834 aa19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 ZYXQ15942 572 aaKnown RBP19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 CT47A1Q5JQC4 288 aaPredicted RBP19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 FAM83BQ5T0W9 1011 aa19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 GOPCQ9HD26 462 aa19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 SPTLC3Q9NUV7 552 aa19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 KBTBD4Q9NVX7 518 aa19.55■□□□□ 0.72
PCDHGC3-205ENST00000617641 PSDA5PKW4 1024 aaPredicted RBP19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 MEIS2O14770 477 aa19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 CBFA2T2O43439 604 aa19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 FXR2P51116 673 aaKnown RBP eCLIP19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 ANO3Q9BYT9 981 aa19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 IMPACTQ9P2X3 320 aa19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 LRWD1Q9UFC0 647 aa19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 STAT2P52630 851 aa19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 TMEM266Q2M3C6 531 aa19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 CCDC84Q86UT8 332 aaPredicted RBP19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 P2RX7Q99572 595 aaKnown RBP19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 GLIS2Q9BZE0 524 aaPredicted RBP19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 RMND1Q9NWS8 449 aa19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 CTNND2Q9UQB3 1225 aa19.54■□□□□ 0.72
PCDHGC3-205ENST00000617641 POTEMA6NI47 508 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 CDK11BP21127 795 aaKnown RBP19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 GMPSP49915 693 aaPredicted RBP19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 GJA10Q969M2 543 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 CUEDC2Q9H467 287 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 INTS13Q9NVM9 706 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 GJA3Q9Y6H8 435 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 COBLO75128 1261 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 RPS12P25398 132 aaKnown RBP19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 PTGER2P43116 358 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 PTPN21Q16825 1174 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 ZNF658Q5TYW1 1059 aaPredicted RBP19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 SPATA1Q5VX52 437 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 MICALL2Q8IY33 904 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 HAS1Q92839 578 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 GDAQ9Y2T3 454 aa19.53■□□□□ 0.72
PCDHGC3-205ENST00000617641 ASTN2O75129 1339 aaPredicted RBP19.52■□□□□ 0.72
PCDHGC3-205ENST00000617641 GCFC2P16383 781 aaKnown RBP19.52■□□□□ 0.72
PCDHGC3-205ENST00000617641 GSDMDP57764 484 aa19.52■□□□□ 0.72
PCDHGC3-205ENST00000617641 MAP3K10Q02779 954 aa19.52■□□□□ 0.72
PCDHGC3-205ENST00000617641 SAMD7Q7Z3H4 446 aa19.52■□□□□ 0.72
PCDHGC3-205ENST00000617641 CALML4Q96GE6 196 aa19.52■□□□□ 0.72
PCDHGC3-205ENST00000617641 VCPKMTQ9H867 229 aa19.52■□□□□ 0.72
PCDHGC3-205ENST00000617641 LTBP3Q9NS15 1303 aa19.52■□□□□ 0.72
PCDHGC3-205ENST00000617641 KLRC4O43908 158 aa19.52■□□□□ 0.71
PCDHGC3-205ENST00000617641 GRB10Q13322 594 aa19.52■□□□□ 0.71
PCDHGC3-205ENST00000617641 NLGN2Q8NFZ4 835 aa19.52■□□□□ 0.71
PCDHGC3-205ENST00000617641 UIMC1Q96RL1 719 aa19.52■□□□□ 0.71
PCDHGC3-205ENST00000617641 MAGEF1Q9HAY2 307 aa19.52■□□□□ 0.71
PCDHGC3-205ENST00000617641 OPLAHO14841 1288 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 AP3B2Q13367 1082 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 KMT5BQ4FZB7 885 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 TBC1D10BQ4KMP7 808 aaPredicted RBP19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 TEPSINQ96N21 525 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 MAPK8IP1Q9UQF2 711 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 MYL1P05976 194 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 CCZ1BP86790 482 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 CCZ1P86791 482 aaPredicted RBP19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 PDIA5Q14554 519 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 ARMCX5Q6P1M9 558 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 PNMA5Q96PV4 448 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 RAB34Q9BZG1 259 aa19.51■□□□□ 0.71
PCDHGC3-205ENST00000617641 SMCHD1A6NHR9 2005 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 PHF20L1A8MW92 1017 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 FZD9O00144 591 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 MARCH6O60337 910 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 ASNSP08243 561 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 SKILP12757 684 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 USP11P51784 963 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 VSTM4Q8IW00 320 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 KIFC2Q96AC6 838 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 NAP1L4Q99733 375 aaKnown RBP19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 NUDT12Q9BQG2 462 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 HOXA13P31271 388 aaPredicted RBP19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 PRCPP42785 496 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 MMP14P50281 582 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 ARHGAP4P98171 946 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 TNFAIP1Q13829 316 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 KCNB1Q14721 858 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 SAMD1Q6SPF0 538 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms