RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 TERF2IPQ9NYB0 399 aa6.36□□□□□ -1.39
CUL3-216ENST00000617432 PCDHA4Q9UN74 947 aa6.36□□□□□ -1.39
CUL3-216ENST00000617432 SAMM50Q9Y512 469 aa6.36□□□□□ -1.39
CUL3-216ENST00000617432 RREB1Q92766 1687 aa6.36□□□□□ -1.39
CUL3-216ENST00000617432 ABCC6O95255 1503 aa6.36□□□□□ -1.39
CUL3-216ENST00000617432 SHANK3Q9BYB0 1731 aa6.36□□□□□ -1.39
CUL3-216ENST00000617432 NINLQ9Y2I6 1382 aa6.36□□□□□ -1.39
CUL3-216ENST00000617432 FYB1O15117 783 aa6.35□□□□□ -1.39
CUL3-216ENST00000617432 GAB4Q2WGN9 574 aa6.35□□□□□ -1.39
CUL3-216ENST00000617432 SPPL2CQ8IUH8 684 aa6.35□□□□□ -1.39
CUL3-216ENST00000617432 USHBP1Q8N6Y0 703 aa6.35□□□□□ -1.39
CUL3-216ENST00000617432 PUS7Q96PZ0 661 aaKnown RBP6.35□□□□□ -1.39
CUL3-216ENST00000617432 FAM129BQ96TA1 746 aa6.35□□□□□ -1.39
CUL3-216ENST00000617432 FBRSQ9HAH7 460 aa6.35□□□□□ -1.39
CUL3-216ENST00000617432 LUC7LQ9NQ29 371 aaKnown RBP6.35□□□□□ -1.39
CUL3-216ENST00000617432 MEGF6O75095 1541 aa6.35□□□□□ -1.39
CUL3-216ENST00000617432 SBF2Q86WG5 1849 aa6.35□□□□□ -1.39
CUL3-216ENST00000617432 TNS2Q63HR2 1409 aa6.35□□□□□ -1.39
CUL3-216ENST00000617432 BMP6P22004 513 aa6.34□□□□□ -1.39
CUL3-216ENST00000617432 TPP2P29144 1249 aaPredicted RBP6.34□□□□□ -1.39
CUL3-216ENST00000617432 HOXC9P31274 260 aa6.34□□□□□ -1.39
CUL3-216ENST00000617432 DDB1Q16531 1140 aa6.34□□□□□ -1.39
CUL3-216ENST00000617432 PHLDB3Q6NSJ2 640 aa6.34□□□□□ -1.39
CUL3-216ENST00000617432 EPS8L3Q8TE67 593 aaKnown RBP6.34□□□□□ -1.39
CUL3-216ENST00000617432 COG3Q96JB2 828 aa6.34□□□□□ -1.39
CUL3-216ENST00000617432 TRIT1Q9H3H1 467 aaKnown RBP6.34□□□□□ -1.39
CUL3-216ENST00000617432 NLRP2Q9NX02 1062 aa6.34□□□□□ -1.39
CUL3-216ENST00000617432 MBD1Q9UIS9 605 aaPredicted RBP6.34□□□□□ -1.39
CUL3-216ENST00000617432 AKAP2Q9Y2D5 859 aa6.34□□□□□ -1.39
CUL3-216ENST00000617432 THRAP3Q9Y2W1 955 aaKnown RBP6.34□□□□□ -1.39
CUL3-216ENST00000617432 OVOS2A0A0G2JMS6 1433 aa6.34□□□□□ -1.39
CUL3-216ENST00000617432 HRKO00198 91 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 KCNQ2O43526 872 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 FAM196AQ6ZSG2 479 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 NECAB3Q96P71 396 aaPredicted RBP6.33□□□□□ -1.4
CUL3-216ENST00000617432 CAMKK2Q96RR4 588 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 BDH2Q9BUT1 245 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 DUSP15Q9H1R2 295 aaPredicted RBP6.33□□□□□ -1.4
CUL3-216ENST00000617432 ADAM7Q9H2U9 754 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 CNOT11Q9UKZ1 510 aaKnown RBP6.33□□□□□ -1.4
CUL3-216ENST00000617432 TIMELESSQ9UNS1 1208 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 NHSQ6T4R5 1651 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 CARNS1A5YM72 827 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 OR14I1A6ND48 311 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 WASH4PA8MWX3 477 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 CHRNEQ04844 493 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 EGR3Q06889 387 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 R3HDM1Q15032 1099 aaKnown RBP6.33□□□□□ -1.4
CUL3-216ENST00000617432 LRRC14Q15048 493 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 NKG7Q16617 165 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 HSP90AB2PQ58FF8 381 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 HHIPL2Q6UWX4 724 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 GLYCTKQ8IVS8 523 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 SYT8Q8NBV8 401 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 PPP1R13LQ8WUF5 828 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 IP6K1Q92551 441 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 WNT10AQ9GZT5 417 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 GPR160Q9UJ42 338 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 PALD1Q9ULE6 856 aa6.33□□□□□ -1.4
CUL3-216ENST00000617432 DOT1LQ8TEK3 1739 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 ANKRD26Q9UPS8 1709 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 CCDC7Q96M83 1385 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 OVOL3O00110 214 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 NDUFB5O43674 189 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 ICMTO60725 284 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 CST3P01034 146 aaPredicted RBP6.32□□□□□ -1.4
CUL3-216ENST00000617432 TNNT2P45379 298 aaPredicted RBP6.32□□□□□ -1.4
CUL3-216ENST00000617432 SRSF3P84103 164 aaKnown RBP6.32□□□□□ -1.4
CUL3-216ENST00000617432 NBPF6Q5VWK0 638 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 LLGL2Q6P1M3 1020 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 HID1Q8IV36 788 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 SYTL4Q96C24 671 aaPredicted RBP6.32□□□□□ -1.4
CUL3-216ENST00000617432 NBPF4Q96M43 638 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 CITED4Q96RK1 184 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 PDGFDQ9GZP0 370 aaPredicted RBP6.32□□□□□ -1.4
CUL3-216ENST00000617432 EPB41L4AQ9HCS5 686 aaPredicted RBP6.32□□□□□ -1.4
CUL3-216ENST00000617432 SIRT5Q9NXA8 310 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 DUSP13Q9UII6 198 aa6.32□□□□□ -1.4
CUL3-216ENST00000617432 PRAMEF27A3QJZ7 478 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 H3BRB1 525 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 N4BP3O15049 544 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 IL2RBP14784 551 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 AMPHP49418 695 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 ZXDAP98168 799 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 VMACQ2NL98 169 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 CDH24Q86UP0 819 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 SHISA4Q96DD7 197 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 TUT1Q9H6E5 874 aaKnown RBP6.31□□□□□ -1.4
CUL3-216ENST00000617432 PANK3Q9H999 370 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 EGFL7Q9UHF1 273 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 BTAF1O14981 1849 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 SRCAPQ6ZRS2 3230 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 RTL1A6NKG5 1358 aa6.31□□□□□ -1.4
CUL3-216ENST00000617432 TOGARAM1Q9Y4F4 1720 aa6.3□□□□□ -1.4
CUL3-216ENST00000617432 KIF7Q2M1P5 1343 aa6.3□□□□□ -1.4
CUL3-216ENST00000617432 EXOC5O00471 708 aa6.3□□□□□ -1.4
CUL3-216ENST00000617432 CILPO75339 1184 aa6.3□□□□□ -1.4
CUL3-216ENST00000617432 INPP5AQ14642 412 aa6.3□□□□□ -1.4
CUL3-216ENST00000617432 BCO2Q9BYV7 579 aa6.3□□□□□ -1.4
CUL3-216ENST00000617432 NIF3L1Q9GZT8 377 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms