RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 ADAMTS4O75173 837 aa17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 CALML3P27482 149 aa17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 ALDH5A1P51649 535 aaPredicted RBP17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 MRPL12P52815 198 aaKnown RBP17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 NKX3-2P78367 333 aa17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 GJC2Q5T442 439 aaPredicted RBP17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 IQSEC1Q6DN90 963 aa17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 RNF180Q86T96 592 aa17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 FBXL16Q8N461 479 aa17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 PURBQ96QR8 312 aaKnown RBP17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 PIGSQ96S52 555 aa17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 MPHOSPH6Q99547 160 aaKnown RBP17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 VTA1Q9NP79 307 aa17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 PCDHA1Q9Y5I3 950 aa17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 SNX14Q9Y5W7 946 aa17.96■□□□□ 0.47
SRGAP2C-205ENST00000617209 EDNRBP24530 442 aa17.95■□□□□ 0.46
SRGAP2C-205ENST00000617209 TAPT1Q6NXT6 567 aa17.95■□□□□ 0.46
SRGAP2C-205ENST00000617209 FANCBQ8NB91 859 aa17.95■□□□□ 0.46
SRGAP2C-205ENST00000617209 KLHDC9Q8NEP7 349 aa17.95■□□□□ 0.46
SRGAP2C-205ENST00000617209 TBC1D5Q92609 795 aa17.95■□□□□ 0.46
SRGAP2C-205ENST00000617209 TSEN34Q9BSV6 310 aaKnown RBP17.95■□□□□ 0.46
SRGAP2C-205ENST00000617209 USP26Q9BXU7 913 aa17.95■□□□□ 0.46
SRGAP2C-205ENST00000617209 LRRC2Q9BYS8 371 aa17.95■□□□□ 0.46
SRGAP2C-205ENST00000617209 SENP6Q9GZR1 1112 aaPredicted RBP17.95■□□□□ 0.46
SRGAP2C-205ENST00000617209 H0YGN5 161 aa17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 OPLAHO14841 1288 aa17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 GJA9P57773 515 aa17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 APOA5Q6Q788 366 aa17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 SYNE3Q6ZMZ3 975 aa17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 SYTL5Q8TDW5 730 aaPredicted RBP17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 MYL10Q9BUA6 226 aa17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 UPF3AQ9H1J1 476 aaKnown RBP17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 PHF24Q9UPV7 400 aa17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 Q9Y3F1 56 aa17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 LRRC37A2A6NM11 1700 aa17.94■□□□□ 0.46
SRGAP2C-205ENST00000617209 RBM47A0AV96 593 aaKnown RBP17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 PGK1P00558 417 aa17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 PSMA5P28066 241 aa17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 CST5P28325 142 aaPredicted RBP17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 HSD17B4P51659 736 aa17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 RCAN1P53805 252 aa17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 TNFAIP2Q03169 654 aa17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 C1orf53Q5VUE5 145 aa17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 CCSAPQ6IQ19 270 aaPredicted RBP17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 HOMER1Q86YM7 354 aa17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 SRBD1Q8N5C6 995 aaKnown RBP17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 IWS1Q96ST2 819 aa17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 SPC25Q9HBM1 224 aa17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 SYNRGQ9UMZ2 1314 aa17.93■□□□□ 0.46
SRGAP2C-205ENST00000617209 DNAH12Q6ZR08 3092 aa17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 ADCY6O43306 1168 aa17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 PPP2R5BQ15173 497 aa17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 BLOC1S2Q6QNY1 142 aa17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 SLC39A5Q6ZMH5 540 aa17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 NSUN6Q8TEA1 469 aaKnown RBP17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 RRP36Q96EU6 259 aaKnown RBP17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 TAAR1Q96RJ0 339 aa17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 AGXT2Q9BYV1 514 aa17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 BRPF3Q9ULD4 1205 aa17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 GNEQ9Y223 722 aaKnown RBP17.92■□□□□ 0.46
SRGAP2C-205ENST00000617209 MOXD2PA6NHM9 499 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 CFBP00751 764 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 ADCYAP1R1P41586 468 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 PDE4DQ08499 809 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 SNX17Q15036 470 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 LRRC26Q2I0M4 334 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 TMTC3Q6ZXV5 915 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 PCSK9Q8NBP7 692 aaKnown RBP17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 LENG1Q96BZ8 264 aaPredicted RBP17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 TCEANC2Q96MN5 208 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 JAKMIP1Q96N16 626 aaKnown RBP17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 RMDN3Q96TC7 470 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 PDGFCQ9NRA1 345 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 RBM28Q9NW13 759 aaKnown RBP17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 COL20A1Q9P218 1284 aa17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 DDX49Q9Y6V7 483 aaKnown RBP17.91■□□□□ 0.46
SRGAP2C-205ENST00000617209 KIAA1217Q5T5P2 1943 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 CTAGE5O15320 804 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 ZBTB43O43298 467 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 PLEKHA8P1O95397 391 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 MYCNP04198 464 aaPredicted RBP17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 SMPD1P17405 629 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 RXRAP19793 462 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 RPS6KB1P23443 525 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 ACLYP53396 1101 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 KCNA10Q16322 511 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 DUSP28Q4G0W2 176 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 EEPD1Q7L9B9 569 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 FBXO16Q8IX29 292 aaPredicted RBP17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 TM6SF1Q9BZW5 370 aa17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 SEC63Q9UGP8 760 aaKnown RBP17.9■□□□□ 0.46
SRGAP2C-205ENST00000617209 C6orf222P0C671 652 aaPredicted RBP17.89■□□□□ 0.45
SRGAP2C-205ENST00000617209 MICU3Q86XE3 530 aa17.89■□□□□ 0.45
SRGAP2C-205ENST00000617209 WDR11Q9BZH6 1224 aa17.89■□□□□ 0.45
SRGAP2C-205ENST00000617209 ZSWIM6Q9HCJ5 1215 aa17.89■□□□□ 0.45
SRGAP2C-205ENST00000617209 KLF18A0A0U1RQI7 1052 aa17.88■□□□□ 0.45
SRGAP2C-205ENST00000617209 GCOM1H8Y6P7 765 aaPredicted RBP17.88■□□□□ 0.45
SRGAP2C-205ENST00000617209 NKRFO15226 690 aaKnown RBP eCLIP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms