RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 APPBP2Q92624 585 aa6.24□□□□□ -1.41
NEAT1-205ENST00000616315 PWWP2AQ96N64 755 aa6.24□□□□□ -1.41
NEAT1-205ENST00000616315 ASCC2Q9H1I8 757 aaPredicted RBP6.24□□□□□ -1.41
NEAT1-205ENST00000616315 FANCLQ9NW38 375 aa6.24□□□□□ -1.41
NEAT1-205ENST00000616315 ZNF214Q9UL59 606 aaPredicted RBP6.24□□□□□ -1.41
NEAT1-205ENST00000616315 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
NEAT1-205ENST00000616315 ZC3H12DA2A288 527 aaKnown RBP6.23□□□□□ -1.41
NEAT1-205ENST00000616315 PRICKLE3O43900 615 aaPredicted RBP6.23□□□□□ -1.41
NEAT1-205ENST00000616315 UBOX5O94941 541 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 CEBPAP49715 358 aaPredicted RBP6.23□□□□□ -1.41
NEAT1-205ENST00000616315 NCKAP1LP55160 1127 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 SLC7A5Q01650 507 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 ERICH6BQ5W0A0 696 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 SPATC1Q76KD6 591 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 TMC6Q7Z403 805 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 FRMD5Q7Z6J6 570 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 ANKRD13AQ8IZ07 590 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 ZNF655Q8N720 491 aaPredicted RBP6.23□□□□□ -1.41
NEAT1-205ENST00000616315 THAP3Q8WTV1 239 aaPredicted RBP6.23□□□□□ -1.41
NEAT1-205ENST00000616315 KLHL6Q8WZ60 621 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 DHRS1Q96LJ7 313 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 KANSL2Q9H9L4 492 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 TMEM260Q9NX78 707 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 PFDN2Q9UHV9 154 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 PCDHB10Q9UN67 800 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 MINPP1Q9UNW1 487 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 KDM2BQ8NHM5 1336 aa6.23□□□□□ -1.41
NEAT1-205ENST00000616315 ESYT3A0FGR9 886 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 FADS2P1A8MWK0 482 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 ABLIM1O14639 778 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 FFAR3O14843 346 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 RGS13O14921 159 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 SUSD5O60279 629 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 DIAPH1O60610 1272 aaKnown RBP6.22□□□□□ -1.41
NEAT1-205ENST00000616315 SYPP08247 313 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 GBP1P32455 592 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 PCBP3P57721 371 aaKnown RBP6.22□□□□□ -1.41
NEAT1-205ENST00000616315 ZXDCQ2QGD7 858 aaPredicted RBP6.22□□□□□ -1.41
NEAT1-205ENST00000616315 NBPF9Q3BBW0 867 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 GNPTABQ3T906 1256 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 SPATS1Q496A3 300 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 HSF5Q4G112 596 aaPredicted RBP6.22□□□□□ -1.41
NEAT1-205ENST00000616315 KIAA1211LQ6NV74 962 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 JMYQ8N9B5 988 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 SLC6A18Q96N87 628 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 BDH2Q9BUT1 245 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 EPN3Q9H201 632 aa6.22□□□□□ -1.41
NEAT1-205ENST00000616315 SLKQ9H2G2 1235 aaPredicted RBP6.22□□□□□ -1.41
NEAT1-205ENST00000616315 SSU72P8A0A1W2PR75 194 aa6.21□□□□□ -1.42
NEAT1-205ENST00000616315 MPOP05164 745 aa6.21□□□□□ -1.42
NEAT1-205ENST00000616315 PMS1P54277 932 aaKnown RBP6.21□□□□□ -1.42
NEAT1-205ENST00000616315 PLP2Q04941 152 aa6.21□□□□□ -1.42
NEAT1-205ENST00000616315 SQSTM1Q13501 440 aa6.21□□□□□ -1.42
NEAT1-205ENST00000616315 RTP5Q14D33 572 aa6.21□□□□□ -1.42
NEAT1-205ENST00000616315 SLC10A6Q3KNW5 377 aa6.21□□□□□ -1.42
NEAT1-205ENST00000616315 RNF187Q5TA31 235 aaPredicted RBP6.21□□□□□ -1.42
NEAT1-205ENST00000616315 OLFML2BQ68BL8 750 aa6.21□□□□□ -1.42
NEAT1-205ENST00000616315 SUCOQ9UBS9 1254 aaKnown RBP6.21□□□□□ -1.42
NEAT1-205ENST00000616315 BUB1BO60566 1050 aaPredicted RBP6.2□□□□□ -1.42
NEAT1-205ENST00000616315 PRAMEF1O95521 474 aa6.2□□□□□ -1.42
NEAT1-205ENST00000616315 NAT2P11245 290 aa6.2□□□□□ -1.42
NEAT1-205ENST00000616315 INSRRP14616 1297 aa6.2□□□□□ -1.42
NEAT1-205ENST00000616315 RAB3GAP1Q15042 981 aa6.2□□□□□ -1.42
NEAT1-205ENST00000616315 TAF7LQ5H9L4 462 aa6.2□□□□□ -1.42
NEAT1-205ENST00000616315 NBPF12Q5TAG4 269 aaPredicted RBP6.2□□□□□ -1.42
NEAT1-205ENST00000616315 GALNT18Q6P9A2 607 aa6.2□□□□□ -1.42
NEAT1-205ENST00000616315 TMEM192Q8IY95 271 aa6.2□□□□□ -1.42
NEAT1-205ENST00000616315 SMARCC1Q92922 1105 aaPredicted RBP6.2□□□□□ -1.42
NEAT1-205ENST00000616315 BORCS6Q96GS4 357 aa6.2□□□□□ -1.42
NEAT1-205ENST00000616315 TNFRSF10DQ9UBN6 386 aa6.2□□□□□ -1.42
NEAT1-205ENST00000616315 GPR55Q9Y2T6 319 aaPredicted RBP6.2□□□□□ -1.42
NEAT1-205ENST00000616315 PTCH2Q9Y6C5 1203 aa6.2□□□□□ -1.42
NEAT1-205ENST00000616315 IQCA1LA6NCM1 817 aa6.19□□□□□ -1.42
NEAT1-205ENST00000616315 NUDT19A8MXV4 375 aa6.19□□□□□ -1.42
NEAT1-205ENST00000616315 CLEC3AO75596 197 aa6.19□□□□□ -1.42
NEAT1-205ENST00000616315 CDK11BP21127 795 aaKnown RBP6.19□□□□□ -1.42
NEAT1-205ENST00000616315 ZNF143P52747 638 aaPredicted RBP6.19□□□□□ -1.42
NEAT1-205ENST00000616315 TDRD10Q5VZ19 366 aaKnown RBP6.19□□□□□ -1.42
NEAT1-205ENST00000616315 C16orf86Q6ZW13 317 aa6.19□□□□□ -1.42
NEAT1-205ENST00000616315 KIAA0907Q7Z7F0 614 aaPredicted RBP6.19□□□□□ -1.42
NEAT1-205ENST00000616315 PPFIBP1Q86W92 1011 aa6.19□□□□□ -1.42
NEAT1-205ENST00000616315 LRRC47Q8N1G4 583 aaKnown RBP6.19□□□□□ -1.42
NEAT1-205ENST00000616315 FCRL2Q96LA5 508 aaPredicted RBP6.19□□□□□ -1.42
NEAT1-205ENST00000616315 FEZ1Q99689 392 aa6.19□□□□□ -1.42
NEAT1-205ENST00000616315 SPATA9Q9BWV2 254 aa6.19□□□□□ -1.42
NEAT1-205ENST00000616315 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.19□□□□□ -1.423e-85■□□□□ 11.1
NEAT1-205ENST00000616315 PRKAB1Q9Y478 270 aa6.19□□□□□ -1.42
NEAT1-205ENST00000616315 TAF6LQ9Y6J9 622 aa6.19□□□□□ -1.42
NEAT1-205ENST00000616315 AGRPO00253 132 aa6.18□□□□□ -1.42
NEAT1-205ENST00000616315 PRKCAP17252 672 aa6.18□□□□□ -1.42
NEAT1-205ENST00000616315 IGFBP6P24592 240 aaPredicted RBP6.18□□□□□ -1.42
NEAT1-205ENST00000616315 SLURP1P55000 103 aa6.18□□□□□ -1.42
NEAT1-205ENST00000616315 RNF4P78317 190 aa6.18□□□□□ -1.42
NEAT1-205ENST00000616315 CBX2Q14781 532 aaPredicted RBP6.18□□□□□ -1.42
NEAT1-205ENST00000616315 PTPROQ16827 1216 aa6.18□□□□□ -1.42
NEAT1-205ENST00000616315 HHIPL2Q6UWX4 724 aa6.18□□□□□ -1.42
NEAT1-205ENST00000616315 SLCO6A1Q86UG4 719 aa6.18□□□□□ -1.42
NEAT1-205ENST00000616315 ZSWIM2Q8NEG5 633 aa6.18□□□□□ -1.42
NEAT1-205ENST00000616315 PRDM14Q9GZV8 571 aa6.18□□□□□ -1.42
NEAT1-205ENST00000616315 TMX1Q9H3N1 280 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms