RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 RAB17Q9H0T7 212 aa20.44■□□□□ 0.86
GABPB1-212ENST00000615671 MOSPD1Q9UJG1 213 aa20.44■□□□□ 0.86
GABPB1-212ENST00000615671 PDZD4Q76G19 769 aaPredicted RBP20.44■□□□□ 0.86
GABPB1-212ENST00000615671 SPDYE1Q8NFV5 336 aaPredicted RBP20.44■□□□□ 0.86
GABPB1-212ENST00000615671 MESDQ14696 234 aa20.44■□□□□ 0.86
GABPB1-212ENST00000615671 RUFY4Q6ZNE9 571 aa20.44■□□□□ 0.86
GABPB1-212ENST00000615671 TRPC5Q9UL62 973 aaPredicted RBP20.44■□□□□ 0.86
GABPB1-212ENST00000615671 M0R2C6 588 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 YWHAGP61981 247 aaKnown RBP eCLIP20.43■□□□□ 0.86
GABPB1-212ENST00000615671 MAP7Q14244 749 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 HAUS1Q96CS2 278 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 VCXQ9H320 206 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 NXF1Q9UBU9 619 aaKnown RBP20.43■□□□□ 0.86
GABPB1-212ENST00000615671 KIF3CO14782 793 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 TFAMQ00059 246 aaKnown RBP20.43■□□□□ 0.86
GABPB1-212ENST00000615671 PPP2R5BQ15173 497 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 B4GALNT4Q76KP1 1039 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 CCND2P30279 289 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 CDC26Q8NHZ8 85 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 GDAP1Q8TB36 358 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 SLC38A10Q9HBR0 1119 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 KMT5AQ9NQR1 393 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 FMNL1O95466 1100 aaPredicted RBP20.43■□□□□ 0.86
GABPB1-212ENST00000615671 FGAP02671 866 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 CCDC84Q86UT8 332 aaPredicted RBP20.43■□□□□ 0.86
GABPB1-212ENST00000615671 BTBD18B2RXH4 712 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 LMCD1Q9NZU5 365 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 NUP160Q12769 1436 aa20.43■□□□□ 0.86
GABPB1-212ENST00000615671 POC1B-GALNT4F8VUJ3 575 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 KRT3P12035 628 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 TTC19Q6DKK2 380 aaPredicted RBP20.42■□□□□ 0.86
GABPB1-212ENST00000615671 RETREG2Q8NC44 543 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 ATP6V1E2Q96A05 226 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 SLITRK6Q9H5Y7 841 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 XDHP47989 1333 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 PTGDRQ13258 359 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 MMEL1Q495T6 779 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 NLGN1Q8N2Q7 840 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 ATF2P15336 505 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 NSFP46459 744 aaKnown RBP20.42■□□□□ 0.86
GABPB1-212ENST00000615671 HP1BP3Q5SSJ5 553 aaPredicted RBP20.42■□□□□ 0.86
GABPB1-212ENST00000615671 MYSM1Q5VVJ2 828 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 P3H4Q92791 437 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 COA7Q96BR5 231 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 FTOQ9C0B1 505 aaKnown RBP eCLIP20.42■□□□□ 0.86
GABPB1-212ENST00000615671 METTL14Q9HCE5 456 aaKnown RBP20.42■□□□□ 0.86
GABPB1-212ENST00000615671 KCNG1Q9UIX4 513 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 RNF8O76064 485 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 PTPREP23469 700 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 CLCN1P35523 988 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 SESN3P58005 492 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 ANKRD13CQ8N6S4 541 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 LRRN2O75325 713 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 ACTN1P12814 892 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 ATP1A2P50993 1020 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 CABS1Q96KC9 395 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 CCDC94Q9BW85 323 aaPredicted RBP20.42■□□□□ 0.86
GABPB1-212ENST00000615671 MAP3K15Q6ZN16 1313 aa20.42■□□□□ 0.86
GABPB1-212ENST00000615671 SRGAP2CP0DJJ0 459 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 CD58P19256 250 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 GOLGA8FQ08AF8 430 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 GOLGA8DPQ0D2H9 430 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 ABCC10Q5T3U5 1492 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 TESK2Q96S53 571 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 IPO11Q9UI26 975 aaKnown RBP20.41■□□□□ 0.86
GABPB1-212ENST00000615671 COL4A3BPQ9Y5P4 624 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 HOXB7P09629 217 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 KRT26Q7Z3Y9 468 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 GRK7Q8WTQ7 553 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 PRDM5Q9NQX1 630 aaPredicted RBP20.41■□□□□ 0.86
GABPB1-212ENST00000615671 MED23Q9ULK4 1368 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 AOX1Q06278 1338 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 INPP5BP32019 993 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 RMDN2Q96LZ7 410 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 INPP5FQ9Y2H2 1132 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 PFDN6O15212 129 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 ADALQ6DHV7 355 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 LMNTD2Q8IXW0 634 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 UBE2SQ16763 222 aa20.41■□□□□ 0.86
GABPB1-212ENST00000615671 SRP68Q9UHB9 627 aaKnown RBP20.41■□□□□ 0.86
GABPB1-212ENST00000615671 TROVE2P10155 538 aaKnown RBP eCLIP20.4■□□□□ 0.86
GABPB1-212ENST00000615671 MTMR3Q13615 1198 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 OGFRQ9NZT2 677 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 TSKSQ9UJT2 592 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 PRAMEF22A3QJZ6 481 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 KRT33BQ14525 404 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 CEP170P1Q96L14 293 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 TPCN1Q9ULQ1 816 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 RASSF7Q02833 373 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 ARHGEF6Q15052 776 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 FAM49AQ9H0Q0 323 aaPredicted RBP20.4■□□□□ 0.86
GABPB1-212ENST00000615671 TLR7Q9NYK1 1049 aaKnown RBP20.4■□□□□ 0.86
GABPB1-212ENST00000615671 KRT27Q7Z3Y8 459 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 SMYD4Q8IYR2 804 aaPredicted RBP20.4■□□□□ 0.86
GABPB1-212ENST00000615671 EAF2Q96CJ1 260 aaPredicted RBP20.4■□□□□ 0.86
GABPB1-212ENST00000615671 DYNLL2Q96FJ2 89 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 MTRQ99707 1265 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 SAR1BQ9Y6B6 198 aa20.4■□□□□ 0.86
GABPB1-212ENST00000615671 N4BP1O75113 896 aaKnown RBP20.4■□□□□ 0.86
GABPB1-212ENST00000615671 HOXA13P31271 388 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms