RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 STK36Q9NRP7 1315 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 C12orf60Q5U649 245 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 FASTKD5Q7L8L6 764 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 CCDC91Q7Z6B0 441 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 ENAHQ8N8S7 591 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 CSRNP2Q9H175 543 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 METTL14Q9HCE5 456 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 STK17AQ9UEE5 414 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 UBN2Q6ZU65 1347 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 KIAA0754O94854 1291 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 TNNC2P02585 160 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 RPN1P04843 607 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 PSAPP07602 524 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 EIF2AK2P19525 551 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 ZNF445P59923 1031 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 GRM4Q14833 912 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 CYP26C1Q6V0L0 522 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 MB21D2Q8IYB1 491 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 ZNF830Q96NB3 372 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 UBR1Q8IWV7 1749 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 CD19P15391 556 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 ATF7P17544 494 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 UBE2SQ16763 222 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 ODR4Q5SWX8 454 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 DYDC1Q8WWB3 177 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 BCL9O00512 1426 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 F5H6K3 240 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 PLCB3Q01970 1234 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 KLRC3Q07444 240 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 NR5A1Q13285 461 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 RASA3Q14644 834 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 KARSQ15046 597 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 ARMCX5Q6P1M9 558 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 PRPF38AQ8NAV1 312 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 RNF169Q8NCN4 708 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 TDRD7Q8NHU6 1098 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 OTUD5Q96G74 571 aa10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 ARMCX3Q9UH62 379 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 CYB5R4Q7L1T6 521 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 RDH13Q8NBN7 331 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 AGBL3Q8NEM8 1001 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 POLR1AO95602 1720 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 FSD2A1L4K1 749 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 RFX5P48382 616 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 PFKFB3Q16875 520 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 HS1BP3Q53T59 392 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 CCDC122Q5T0U0 273 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 SNRNP48Q6IEG0 339 aaKnown RBP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 SERPINA10Q9UK55 444 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 PSMD14O00487 310 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 NOLC1Q14978 699 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 SBK1Q52WX2 424 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 TRMT44Q8IYL2 757 aaKnown RBP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 CEP112Q8N8E3 955 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 IMPACTQ9P2X3 320 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 ZNF70Q9UC06 446 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 MTUS1Q9ULD2 1270 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 MYL1P05976 194 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 HOXA13P31271 388 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 BMS1Q14692 1282 aaKnown RBP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 GSTA5Q7RTV2 222 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 CEP170P1Q96L14 293 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 FAM193BQ96PV7 902 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 IKBKGQ9Y6K9 419 aa10.43□□□□□ -0.74
CLTCL1-208ENST00000615606 USP17L15C9J2P7 530 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 USP17L13C9JLJ4 530 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 USP17L11C9JVI0 530 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 USP17L18D6R9N7 530 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 USP17L22D6RA61 530 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 USP17L17D6RBQ6 530 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 USP17L19D6RCP7 530 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 USP17L20D6RJB6 530 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 ATP2A1O14983 1001 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 XPOTO43592 962 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 HOXA7P31268 230 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 NDUFA8P51970 172 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 USP17L24Q0WX57 530 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 SEL1L2Q5TEA6 688 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 ARL6IP4Q66PJ3 421 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 GIMAP8Q8ND71 665 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 RBM46Q8TBY0 533 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 FAM151AQ8WW52 585 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 GSDMAQ96QA5 445 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 MAK16Q9BXY0 300 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 LY9Q9HBG7 655 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 LZTFL1Q9NQ48 299 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 AKT3Q9Y243 479 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 COMMD10Q9Y6G5 202 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 FLT1P17948 1338 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 PABPN1LA6NDY0 278 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 AKR1B1P15121 316 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 LMNB1P20700 586 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 KRT9P35527 623 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 GMPSP49915 693 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 MORC3Q14149 939 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 STXBP2Q15833 593 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 EEPD1Q7L9B9 569 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 TIGD1Q96MW7 591 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 ZSWIM4Q9H7M6 989 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms