RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 FGD1P98174 961 aa19.4■□□□□ 0.7
CBWD3-211ENST00000615061 APOBRQ0VD83 1088 aa19.4■□□□□ 0.7
CBWD3-211ENST00000615061 ANKLE1Q8NAG6 615 aa19.4■□□□□ 0.7
CBWD3-211ENST00000615061 BRF1Q92994 677 aa19.4■□□□□ 0.7
CBWD3-211ENST00000615061 ABHD16BQ9H3Z7 469 aa19.4■□□□□ 0.7
CBWD3-211ENST00000615061 MRPL11Q9Y3B7 192 aaKnown RBP19.4■□□□□ 0.7
CBWD3-211ENST00000615061 PNMA6FA0A0J9YX94 578 aa19.39■□□□□ 0.7
CBWD3-211ENST00000615061 MYCNP04198 464 aaPredicted RBP19.39■□□□□ 0.7
CBWD3-211ENST00000615061 PSMA5P28066 241 aa19.39■□□□□ 0.7
CBWD3-211ENST00000615061 ALDH5A1P51649 535 aaPredicted RBP19.39■□□□□ 0.7
CBWD3-211ENST00000615061 TMTC3Q6ZXV5 915 aa19.39■□□□□ 0.7
CBWD3-211ENST00000615061 UPF3BQ9BZI7 483 aaKnown RBP19.39■□□□□ 0.7
CBWD3-211ENST00000615061 ASB14A6NK59 587 aa19.39■□□□□ 0.69
CBWD3-211ENST00000615061 ZBTB43O43298 467 aa19.39■□□□□ 0.69
CBWD3-211ENST00000615061 CFBP00751 764 aa19.39■□□□□ 0.69
CBWD3-211ENST00000615061 AKR1A1P14550 325 aa19.39■□□□□ 0.69
CBWD3-211ENST00000615061 CCDC144BQ3MJ40 725 aa19.39■□□□□ 0.69
CBWD3-211ENST00000615061 GJC2Q5T442 439 aaPredicted RBP19.39■□□□□ 0.69
CBWD3-211ENST00000615061 SYNE3Q6ZMZ3 975 aa19.39■□□□□ 0.69
CBWD3-211ENST00000615061 NECAB2Q7Z6G3 386 aa19.39■□□□□ 0.69
CBWD3-211ENST00000615061 FBXO16Q8IX29 292 aaPredicted RBP19.39■□□□□ 0.69
CBWD3-211ENST00000615061 RGS22Q8NE09 1264 aa19.39■□□□□ 0.69
CBWD3-211ENST00000615061 SYTL5Q8TDW5 730 aaPredicted RBP19.39■□□□□ 0.69
CBWD3-211ENST00000615061 NAP1L2Q9ULW6 460 aaPredicted RBP19.39■□□□□ 0.69
CBWD3-211ENST00000615061 PGK1P00558 417 aa19.38■□□□□ 0.69
CBWD3-211ENST00000615061 RARBP10826 455 aa19.38■□□□□ 0.69
CBWD3-211ENST00000615061 PTGS1P23219 599 aa19.38■□□□□ 0.69
CBWD3-211ENST00000615061 GNAQP50148 359 aa19.38■□□□□ 0.69
CBWD3-211ENST00000615061 ZSWIM6Q9HCJ5 1215 aa19.38■□□□□ 0.69
CBWD3-211ENST00000615061 PDGFCQ9NRA1 345 aa19.38■□□□□ 0.69
CBWD3-211ENST00000615061 ADD3Q9UEY8 706 aaKnown RBP19.38■□□□□ 0.69
CBWD3-211ENST00000615061 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.37■□□□□ 0.69
CBWD3-211ENST00000615061 CAPN2P17655 700 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 SMARCA1P28370 1054 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 IRX5P78411 483 aaPredicted RBP19.37■□□□□ 0.69
CBWD3-211ENST00000615061 RUFY3Q7L099 469 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 MCF2L2Q86YR7 1114 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 RRP36Q96EU6 259 aaKnown RBP19.37■□□□□ 0.69
CBWD3-211ENST00000615061 TAAR1Q96RJ0 339 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 LZTS2Q9BRK4 669 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 XPNPEP3Q9NQH7 507 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 FAM217BQ9NTX9 383 aaPredicted RBP19.37■□□□□ 0.69
CBWD3-211ENST00000615061 FAM184BQ9ULE4 1060 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 GOLGA8AA7E2F4 631 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 GOLGA8BA8MQT2 603 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 CDC27P30260 824 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 RTN1Q16799 776 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 TMEM63BQ5T3F8 832 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 MORC4Q8TE76 937 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 AGXT2Q9BYV1 514 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 C11orf49Q9H6J7 331 aa19.37■□□□□ 0.69
CBWD3-211ENST00000615061 COL6A1P12109 1028 aa19.36■□□□□ 0.69
CBWD3-211ENST00000615061 HOXA13P31271 388 aaPredicted RBP19.36■□□□□ 0.69
CBWD3-211ENST00000615061 ADCYAP1R1P41586 468 aa19.36■□□□□ 0.69
CBWD3-211ENST00000615061 LRRC41Q15345 812 aa19.36■□□□□ 0.69
CBWD3-211ENST00000615061 TAPT1Q6NXT6 567 aa19.36■□□□□ 0.69
CBWD3-211ENST00000615061 CNTNAP5Q8WYK1 1306 aa19.35■□□□□ 0.69
CBWD3-211ENST00000615061 HSD17B4P51659 736 aa19.35■□□□□ 0.69
CBWD3-211ENST00000615061 FUT2Q10981 343 aa19.35■□□□□ 0.69
CBWD3-211ENST00000615061 TOB2Q14106 344 aaPredicted RBP19.35■□□□□ 0.69
CBWD3-211ENST00000615061 DNERQ8NFT8 737 aa19.35■□□□□ 0.69
CBWD3-211ENST00000615061 DPF3Q92784 378 aa19.35■□□□□ 0.69
CBWD3-211ENST00000615061 LARP6Q9BRS8 491 aaKnown RBP19.35■□□□□ 0.69
CBWD3-211ENST00000615061 SEC63Q9UGP8 760 aaKnown RBP19.35■□□□□ 0.69
CBWD3-211ENST00000615061 CYP46A1Q9Y6A2 500 aa19.35■□□□□ 0.69
CBWD3-211ENST00000615061 SYNRGQ9UMZ2 1314 aa19.35■□□□□ 0.69
CBWD3-211ENST00000615061 DNM1LO00429 736 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 EDNRBP24530 442 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 ADD1P35611 737 aaKnown RBP19.34■□□□□ 0.69
CBWD3-211ENST00000615061 C8orf34Q49A92 452 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 FBXL16Q8N461 479 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 ARRDC4Q8NCT1 418 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 RMDN3Q96TC7 470 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 TM6SF1Q9BZW5 370 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 RBM28Q9NW13 759 aaKnown RBP19.34■□□□□ 0.69
CBWD3-211ENST00000615061 MYADML2A6NDP7 307 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 ADAMTS4O75173 837 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 METAP2P50579 478 aaKnown RBP eCLIP19.34■□□□□ 0.69
CBWD3-211ENST00000615061 GHRHRQ02643 423 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 HTATIP2Q9BUP3 242 aa19.34■□□□□ 0.69
CBWD3-211ENST00000615061 SENP6Q9GZR1 1112 aaPredicted RBP19.34■□□□□ 0.69
CBWD3-211ENST00000615061 KIAA1217Q5T5P2 1943 aa19.33■□□□□ 0.69
CBWD3-211ENST00000615061 DUSP11O75319 330 aaKnown RBP19.33■□□□□ 0.68
CBWD3-211ENST00000615061 EIF2AK2P19525 551 aaKnown RBP19.33■□□□□ 0.68
CBWD3-211ENST00000615061 PDE4DQ08499 809 aa19.33■□□□□ 0.68
CBWD3-211ENST00000615061 GPKOWQ92917 476 aaPredicted RBP eCLIP19.33■□□□□ 0.68
CBWD3-211ENST00000615061 VTA1Q9NP79 307 aa19.33■□□□□ 0.68
CBWD3-211ENST00000615061 SMPD1P17405 629 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 TNFAIP2Q03169 654 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 NOL8Q76FK4 1167 aaKnown RBP19.32■□□□□ 0.68
CBWD3-211ENST00000615061 NSUN6Q8TEA1 469 aaKnown RBP19.32■□□□□ 0.68
CBWD3-211ENST00000615061 FERMT2Q96AC1 680 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 MAF1Q9H063 256 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 LOC102724159A0A0B4J2E5 919 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 KBTBD13C9JR72 458 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 PPFIA3O75145 1194 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 RCAN1P53805 252 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 ATN1P54259 1190 aaPredicted RBP19.32■□□□□ 0.68
CBWD3-211ENST00000615061 TRAF1Q13077 416 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 PWP2Q15269 919 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms