RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 GNAT2P19087 354 aa13.02□□□□□ -0.32
CDH5-208ENST00000614547 ARID4AP29374 1257 aaPredicted RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 SARSP49591 514 aaKnown RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 HDLBPQ00341 1268 aaKnown RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 DCAF17Q5H9S7 520 aaPredicted RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 SGMS1Q86VZ5 419 aa13.02□□□□□ -0.32
CDH5-208ENST00000614547 CCDC155Q8N6L0 562 aa13.02□□□□□ -0.32
CDH5-208ENST00000614547 ENAHQ8N8S7 591 aaPredicted RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 ZBTB38Q8NAP3 1195 aaPredicted RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 TSEN2Q8NCE0 465 aaKnown RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.02□□□□□ -0.32
CDH5-208ENST00000614547 SEC63Q9UGP8 760 aaKnown RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 LIMA1Q9UHB6 759 aaKnown RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 GGT7Q9UJ14 662 aa13.02□□□□□ -0.32
CDH5-208ENST00000614547 NOVA2Q9UNW9 492 aaKnown RBP13.02□□□□□ -0.32
CDH5-208ENST00000614547 PLAAQ9Y263 795 aa13.02□□□□□ -0.32
CDH5-208ENST00000614547 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
CDH5-208ENST00000614547 CALML3P27482 149 aa13.02□□□□□ -0.33
CDH5-208ENST00000614547 TNNI2P48788 182 aa13.02□□□□□ -0.33
CDH5-208ENST00000614547 WDR93Q6P2C0 686 aa13.02□□□□□ -0.33
CDH5-208ENST00000614547 KAT2BQ92831 832 aa13.02□□□□□ -0.33
CDH5-208ENST00000614547 PAIP2Q9BPZ3 127 aaKnown RBP13.02□□□□□ -0.33
CDH5-208ENST00000614547 STK38LQ9Y2H1 464 aa13.02□□□□□ -0.33
CDH5-208ENST00000614547 PLCG1P19174 1290 aa13.02□□□□□ -0.33
CDH5-208ENST00000614547 KLHL30Q0D2K2 578 aa13.02□□□□□ -0.33
CDH5-208ENST00000614547 CDKAL1Q5VV42 579 aa13.02□□□□□ -0.33
CDH5-208ENST00000614547 HIBCHQ6NVY1 386 aaPredicted RBP13.02□□□□□ -0.33
CDH5-208ENST00000614547 P2RX5Q93086 422 aa13.02□□□□□ -0.33
CDH5-208ENST00000614547 LSM14BQ9BX40 385 aaKnown RBP13.02□□□□□ -0.33
CDH5-208ENST00000614547 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.02□□□□□ -0.33
CDH5-208ENST00000614547 LRRC53A6NM62 1247 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 TSPY3P0CV98 308 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 TSPY8P0CW00 308 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 EIF6P56537 245 aaKnown RBP13.01□□□□□ -0.33
CDH5-208ENST00000614547 SLC9C1Q4G0N8 1177 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 TBC1D5Q92609 795 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 UBXN6Q9BZV1 441 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 VEZTQ9HBM0 779 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 ADAMTS1Q9UHI8 967 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 SNX12Q9UMY4 172 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 REXO2Q9Y3B8 237 aaKnown RBP13.01□□□□□ -0.33
CDH5-208ENST00000614547 CYP2D6P10635 497 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 TFAP4Q01664 338 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 RPS6KA1Q15418 735 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 DAAM2Q86T65 1068 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 CACNA2D3Q8IZS8 1091 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
CDH5-208ENST00000614547 SUFUQ9UMX1 484 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDH5-208ENST00000614547 PALMO75781 387 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 PCCAP05165 728 aaPredicted RBP13.01□□□□□ -0.33
CDH5-208ENST00000614547 EEF1GP26641 437 aaKnown RBP13.01□□□□□ -0.33
CDH5-208ENST00000614547 SLC1A4P43007 532 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 ADCY1Q08828 1119 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 IKQ13123 557 aaPredicted RBP13.01□□□□□ -0.33
CDH5-208ENST00000614547 FAM133BQ5BKY9 247 aaKnown RBP13.01□□□□□ -0.33
CDH5-208ENST00000614547 SV2BQ7L1I2 683 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 MICAL1Q8TDZ2 1067 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 CD2APQ9Y5K6 639 aa13.01□□□□□ -0.33
CDH5-208ENST00000614547 PSMD14O00487 310 aa13□□□□□ -0.33
CDH5-208ENST00000614547 MEFVO15553 781 aaPredicted RBP13□□□□□ -0.33
CDH5-208ENST00000614547 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
CDH5-208ENST00000614547 VEGFAP15692 232 aaPredicted RBP13□□□□□ -0.33
CDH5-208ENST00000614547 LSP1P33241 339 aa13□□□□□ -0.33
CDH5-208ENST00000614547 SNCBQ16143 134 aa13□□□□□ -0.33
CDH5-208ENST00000614547 ANKRD40Q6AI12 368 aa13□□□□□ -0.33
CDH5-208ENST00000614547 CCT8L2Q96SF2 557 aa13□□□□□ -0.33
CDH5-208ENST00000614547 VIPAS39Q9H9C1 493 aa13□□□□□ -0.33
CDH5-208ENST00000614547 RBM28Q9NW13 759 aaKnown RBP13□□□□□ -0.33
CDH5-208ENST00000614547 SLCO1A2P46721 670 aa13□□□□□ -0.33
CDH5-208ENST00000614547 CASP7P55210 303 aa13□□□□□ -0.33
CDH5-208ENST00000614547 NLRP14Q86W24 1093 aa13□□□□□ -0.33
CDH5-208ENST00000614547 DISC1Q9NRI5 854 aa13□□□□□ -0.33
CDH5-208ENST00000614547 ATG3Q9NT62 314 aa13□□□□□ -0.33
CDH5-208ENST00000614547 HAUS2Q9NVX0 235 aa13□□□□□ -0.33
CDH5-208ENST00000614547 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
CDH5-208ENST00000614547 NIP7Q9Y221 180 aaKnown RBP eCLIP13□□□□□ -0.33
CDH5-208ENST00000614547 PDE8AO60658 829 aa13□□□□□ -0.33
CDH5-208ENST00000614547 FAM153BP0C7A2 387 aa13□□□□□ -0.33
CDH5-208ENST00000614547 CALM1P0DP23 149 aa13□□□□□ -0.33
CDH5-208ENST00000614547 CALM2P0DP24 149 aa13□□□□□ -0.33
CDH5-208ENST00000614547 CALM3P0DP25 149 aa13□□□□□ -0.33
CDH5-208ENST00000614547 FAM153CQ494X1 144 aa13□□□□□ -0.33
CDH5-208ENST00000614547 SFMBT2Q5VUG0 894 aa13□□□□□ -0.33
CDH5-208ENST00000614547 ZNF473Q8WTR7 871 aaKnown RBP13□□□□□ -0.33
CDH5-208ENST00000614547 FAM153AQ9UHL3 310 aa13□□□□□ -0.33
CDH5-208ENST00000614547 CAPN11Q9UMQ6 739 aa13□□□□□ -0.33
CDH5-208ENST00000614547 PEAK1Q9H792 1746 aa13□□□□□ -0.33
CDH5-208ENST00000614547 SEMA3EO15041 775 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 KIF4AO95239 1232 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 ABCB4P21439 1286 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 SCP2P22307 547 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 STK4Q13043 487 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 NEDD9Q14511 834 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 TMEM266Q2M3C6 531 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 ZNF526Q8TF50 670 aaPredicted RBP12.99□□□□□ -0.33
CDH5-208ENST00000614547 PIGBQ92521 554 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 CRNKL1Q9BZJ0 848 aaKnown RBP12.99□□□□□ -0.33
CDH5-208ENST00000614547 KLC4Q9NSK0 619 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms