RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 GALNT17Q6IS24 598 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 DAGLBQ8NCG7 672 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 RGS22Q8NE09 1264 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 DCAF4Q8WV16 495 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 AGBL1Q96MI9 1066 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 AMNQ9BXJ7 453 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 TANGO6Q9C0B7 1094 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 DISC1Q9NRI5 854 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 DDX25Q9UHL0 483 aaKnown RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 CTNND2Q9UQB3 1225 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 TRIM49BA6NDI0 452 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 SMTNL1A8MU46 457 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 GOLGA6L6A8MZA4 724 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 H7C1D1 291 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 TULP1O00294 542 aaPredicted RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 MEIS2O14770 477 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 PEX10O60683 326 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 NPM3O75607 178 aaKnown RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 IDEP14735 1019 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 CLCN1P35523 988 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 LONP1P36776 959 aaKnown RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 NT5C2P49902 561 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 TPM4P67936 248 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 SPP2Q13103 211 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 MORC3Q14149 939 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 MCM6Q14566 821 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 GRIPAP1Q4V328 841 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 KANK3Q6NY19 840 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 PDXDC2PQ6P474 469 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 SNX29Q8TEQ0 813 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 CPLX3Q8WVH0 158 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 CDK5RAP3Q96JB5 506 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 ANO3Q9BYT9 981 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 HSD3B7Q9H2F3 369 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 ZHX3Q9H4I2 956 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 TRMT1Q9NXH9 659 aaKnown RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 CD2APQ9Y5K6 639 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 SMCHD1A6NHR9 2005 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 SPDYE3A6NKU9 549 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 MEIS1O00470 390 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 CHMP2AO43633 222 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 CAVIN2O95810 425 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 RPN1P04843 607 aaKnown RBP3.87□□□□□ -1.79
LIG4-205ENST00000614526 SMARCA1P28370 1054 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 CCT6AP40227 531 aaKnown RBP3.87□□□□□ -1.79
LIG4-205ENST00000614526 SARSP49591 514 aaKnown RBP3.87□□□□□ -1.79
LIG4-205ENST00000614526 ASIC1P78348 528 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 CYP4A11Q02928 519 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 MTMR2Q13614 643 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 ECM1Q16610 540 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 ARL6IP4Q66PJ3 421 aaKnown RBP3.87□□□□□ -1.79
LIG4-205ENST00000614526 KCNK18Q7Z418 384 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 CCDC34Q96HJ3 373 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 TEPSINQ96N21 525 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 PURBQ96QR8 312 aaKnown RBP3.87□□□□□ -1.79
LIG4-205ENST00000614526 WRNIP1Q96S55 665 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 MMTAG2Q9BU76 263 aaKnown RBP3.87□□□□□ -1.79
LIG4-205ENST00000614526 GOPCQ9HD26 462 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 GGA3Q9NZ52 723 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 TBC1D7Q9P0N9 293 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 PCDHA12Q9UN75 941 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 TMX2Q9Y320 296 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 R3HCC1Q9Y3T6 440 aaKnown RBP3.87□□□□□ -1.79
LIG4-205ENST00000614526 ATRNL1Q5VV63 1379 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 OPLAHO14841 1288 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 FLOT1O75955 427 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 ASNSP08243 561 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 FCER1AP12319 257 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 ALAS1P13196 640 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 HIRAP54198 1017 aaPredicted RBP3.87□□□□□ -1.79
LIG4-205ENST00000614526 KMT5BQ4FZB7 885 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 SH3RF1Q7Z6J0 888 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 HAS1Q92839 578 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 VCPKMTQ9H867 229 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 SPON1Q9HCB6 807 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 RAVER2Q9HCJ3 691 aaKnown RBP3.87□□□□□ -1.79
LIG4-205ENST00000614526 RNF181Q9P0P0 153 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 ZHX2Q9Y6X8 837 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 NPHP3-ACAD11A0A0J9YXS1 232 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 ESYT2A0FGR8 921 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 PHF20L1A8MW92 1017 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 E9PMD0 336 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 FAM86B1E9PN63 330 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 FZD9O00144 591 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 DDX39AO00148 427 aaKnown RBP3.87□□□□□ -1.79
LIG4-205ENST00000614526 TEX33O43247 280 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 SORBS3O60504 671 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 FAM86B2P0C5J1 330 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 PRCPP42785 496 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 ARHGAP4P98171 946 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 NOLC1Q14978 699 aaKnown RBP eCLIP3.87□□□□□ -1.79
LIG4-205ENST00000614526 LRRC41Q15345 812 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 TMEM266Q2M3C6 531 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 NCAPH2Q6IBW4 605 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 FAM83AQ86UY5 434 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 GPIHBP1Q8IV16 184 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 MLKLQ8NB16 471 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 GMCL1P1Q8NEA9 526 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 MTMR8Q96EF0 704 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 CALML4Q96GE6 196 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms