RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	GPATCH4	Q5T3I0	446 aa	Known RBP	13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	DGKH	Q86XP1	1220 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	PLEKHM2	Q8IWE5	1019 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	FBXO16	Q8IX29	292 aa	Predicted RBP	13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	RGS22	Q8NE09	1264 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	MAFA	Q8NHW3	353 aa	Predicted RBP	13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	ANKS1A	Q92625	1134 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	ESR2	Q92731	530 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	PURB	Q96QR8	312 aa	Known RBP	13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	GPCPD1	Q9NPB8	672 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	MTMR7	Q9Y216	660 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	DDX49	Q9Y6V7	483 aa	Known RBP	13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	MUC3A	Q02505	3323 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	EDNRB	P24530	442 aa		13.08	□□□□□ -0.32
CBWD1-222	ENST00000613508	DNAJB2	P25686	324 aa		13.08	□□□□□ -0.32
CBWD1-222	ENST00000613508	ALDH5A1	P51649	535 aa	Predicted RBP	13.08	□□□□□ -0.32
CBWD1-222	ENST00000613508	HAND2	P61296	217 aa		13.08	□□□□□ -0.32
CBWD1-222	ENST00000613508	DNER	Q8NFT8	737 aa		13.08	□□□□□ -0.32
CBWD1-222	ENST00000613508	MYLIP	Q8WY64	445 aa		13.08	□□□□□ -0.32
CBWD1-222	ENST00000613508	IL23A	Q9NPF7	189 aa		13.08	□□□□□ -0.32
CBWD1-222	ENST00000613508	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.08	□□□□□ -0.32
CBWD1-222	ENST00000613508	TRANK1	O15050	2925 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	HIP1	O00291	1037 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	ZNF213	O14771	459 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	PTGS1	P23219	599 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	CYP2C18	P33260	490 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	RPS6	P62753	249 aa	Known RBP	13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	CCDC178	Q5BJE1	867 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	TMEM63B	Q5T3F8	832 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	SLC30A10	Q6XR72	485 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	RNF207	Q6ZRF8	634 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	KIAA1211	Q6ZU35	1233 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	EEPD1	Q7L9B9	569 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	HERVK_113	Q902F9	699 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	RILPL2	Q969X0	211 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	NOC4L	Q9BVI4	516 aa	Known RBP	13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	WDR11	Q9BZH6	1224 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	HIPK3	Q9H422	1215 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	POLR3E	Q9NVU0	708 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	NEDD4	P46934	1319 aa		13.07	□□□□□ -0.32
CBWD1-222	ENST00000613508	PTPDC1	A2A3K4	754 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	NKRF	O15226	690 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	IGHD	P01880	384 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	FOSL2	P15408	326 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	CPT1A	P50416	773 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	PURA	Q00577	322 aa	Known RBP	13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	ZNF365	Q70YC5	407 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	SCFD2	Q8WU76	684 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	TIFA	Q96CG3	184 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	MPHOSPH6	Q99547	160 aa	Known RBP	13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	DSCC1	Q9BVC3	393 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	PPP1R12C	Q9BZL4	782 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	TRPV6	Q9H1D0	765 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508	LAMA4	Q16363	1823 aa		13.06	□□□□□ -0.32
CBWD1-222	ENST00000613508		A6NJR5	290 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508		B4DLN1	442 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	B4GALT4	O60513	344 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	KPNA6	O60684	536 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	CALML3	P27482	149 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	MRPL12	P52815	198 aa	Known RBP	13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	PDE4D	Q08499	809 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	GRIN2C	Q14957	1233 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	B4GALNT3	Q6L9W6	998 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	IQCA1	Q86XH1	822 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	PNMA1	Q8ND90	353 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	MTIF3	Q9H2K0	278 aa	Known RBP	13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	ZNF576	Q9H609	170 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	DIAPH3	Q9NSV4	1193 aa		13.05	□□□□□ -0.32
CBWD1-222	ENST00000613508	KDM4A	O75164	1064 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	SUPT20HL2	P0C7V6	817 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	ACR	P10323	421 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	PSMC6	P62333	389 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	PPP2R5B	Q15173	497 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	ASPRV1	Q53RT3	343 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	CWC27	Q6UX04	472 aa	Known RBP	13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	ENAH	Q8N8S7	591 aa	Predicted RBP	13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	MTG1	Q9BT17	334 aa	Predicted RBP	13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	PBX4	Q9BYU1	374 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	WNT8A	Q9H1J5	351 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	CTNNA3	Q9UI47	895 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	RAD50	Q92878	1312 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	TTC28	Q96AY4	2481 aa		13.04	□□□□□ -0.32
CBWD1-222	ENST00000613508	FGB	P02675	491 aa		13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	GOLGA8H	P0CJ92	632 aa		13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	PBX2	P40425	430 aa		13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	RAB30	Q15771	203 aa		13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	BRDT	Q58F21	947 aa	Predicted RBP	13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	NFRKB	Q6P4R8	1299 aa		13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	CCDC62	Q6P9F0	684 aa		13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	RPUSD2	Q8IZ73	545 aa	Known RBP	13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	VWCE	Q96DN2	955 aa		13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	ZKSCAN3	Q9BRR0	538 aa		13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	ZSWIM5	Q9P217	1185 aa		13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	XIRP2	A4UGR9	3374 aa		13.03	□□□□□ -0.32
CBWD1-222	ENST00000613508	ABCB11	O95342	1321 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms