RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ADKP55263 362 aaKnown RBP18.48■□□□□ 0.55
CNOT3-208ENST00000613073 TTBK2Q6IQ55 1244 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 ZDHHC15Q96MV8 337 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 TMEM260Q9NX78 707 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 SWAP70Q9UH65 585 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 SCN9AQ15858 1988 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 MYH8P13535 1937 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 IGKV6D-41A0A0C4DH26 115 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 SLC16A2P36021 539 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 CUL4BQ13620 913 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 STRIP1Q5VSL9 837 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 MYCBPQ99417 103 aaPredicted RBP18.47■□□□□ 0.55
CNOT3-208ENST00000613073 CCDC151A5D8V7 595 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 DDTLA6NHG4 134 aaPredicted RBP18.47■□□□□ 0.55
CNOT3-208ENST00000613073 RHOXF2BP0C7M4 288 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 GNA11P29992 359 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 LONP1P36776 959 aaKnown RBP18.47■□□□□ 0.55
CNOT3-208ENST00000613073 PDXDC2PQ6P474 469 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 PNKPQ96T60 521 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 RHOXF2Q9BQY4 288 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 RIOX1Q9H6W3 641 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 KCTD1Q719H9 257 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 ENOX1Q8TC92 643 aaKnown RBP18.47■□□□□ 0.55
CNOT3-208ENST00000613073 NCAPGQ9BPX3 1015 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 DEF6Q9H4E7 631 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 DNAJC18Q9H819 358 aa18.47■□□□□ 0.55
CNOT3-208ENST00000613073 PLIN4Q96Q06 1357 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 MAP2K7O14733 419 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 CHMP4BP1P59074 171 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 NONOQ15233 471 aaKnown RBP eCLIP18.46■□□□□ 0.55
CNOT3-208ENST00000613073 BAG1Q99933 345 aaPredicted RBP18.46■□□□□ 0.55
CNOT3-208ENST00000613073 LZTFL1Q9NQ48 299 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 QSER1Q2KHR3 1735 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 CBFA2T2O43439 604 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 C21orf2O43822 256 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 STAT6P42226 847 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 CCDC96Q2M329 555 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 GSDMAQ96QA5 445 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 ABCB6Q9NP58 842 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 INTS13Q9NVM9 706 aa18.46■□□□□ 0.55
CNOT3-208ENST00000613073 ARHGAP6O43182 974 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 MTF1Q14872 753 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 ASPRV1Q53RT3 343 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 REXO1Q8N1G1 1221 aaKnown RBP18.45■□□□□ 0.54
CNOT3-208ENST00000613073 TBCKQ8TEA7 893 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 CNKSR1Q969H4 720 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 KIFC2Q96AC6 838 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 FAM198AQ9UFP1 575 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 A0A0U1RQJ8 604 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 BEND6Q5SZJ8 279 aaPredicted RBP18.45■□□□□ 0.54
CNOT3-208ENST00000613073 KRT25Q7Z3Z0 450 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 TMEM139Q8IV31 216 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 ADGRF4Q8IZF3 695 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 ATRIPQ8WXE1 791 aa18.45■□□□□ 0.54
CNOT3-208ENST00000613073 CHRM1P11229 460 aaPredicted RBP18.44■□□□□ 0.54
CNOT3-208ENST00000613073 SMARCA1P28370 1054 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 UBA7P41226 1012 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 LRRC31Q6UY01 552 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 VSTM4Q8IW00 320 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 DHX37Q8IY37 1157 aaKnown RBP18.44■□□□□ 0.54
CNOT3-208ENST00000613073 TDRD3Q9H7E2 651 aaKnown RBP18.44■□□□□ 0.54
CNOT3-208ENST00000613073 STK32BQ9NY57 414 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 SNHG28P0DPA3 235 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 ZNF18P17022 549 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 ZNF543Q08ER8 600 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 POTEAQ6S8J7 498 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 EP400NLQ6ZTU2 488 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 SH3BP5LQ7L8J4 393 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 HDXQ7Z353 690 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 NEK8Q86SG6 692 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 ANKZF1Q9H8Y5 726 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 JMJD4Q9H9V9 463 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 DISC1Q9NRI5 854 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 MAPK8IP1Q9UQF2 711 aa18.44■□□□□ 0.54
CNOT3-208ENST00000613073 ERCC5P28715 1186 aaPredicted RBP18.43■□□□□ 0.54
CNOT3-208ENST00000613073 C7orf43Q8WVR3 580 aa18.43■□□□□ 0.54
CNOT3-208ENST00000613073 TNS1Q9HBL0 1735 aaKnown RBP18.43■□□□□ 0.54
CNOT3-208ENST00000613073 RGS17Q9UGC6 210 aaPredicted RBP18.43■□□□□ 0.54
CNOT3-208ENST00000613073 PPP1R3GB7ZBB8 358 aa18.43■□□□□ 0.54
CNOT3-208ENST00000613073 PPIP5K2O43314 1243 aa18.43■□□□□ 0.54
CNOT3-208ENST00000613073 BRD3Q15059 726 aa18.43■□□□□ 0.54
CNOT3-208ENST00000613073 RRAGBQ5VZM2 374 aa18.43■□□□□ 0.54
CNOT3-208ENST00000613073 MICALL1Q8N3F8 863 aa18.43■□□□□ 0.54
CNOT3-208ENST00000613073 CAMKK2Q96RR4 588 aa18.43■□□□□ 0.54
CNOT3-208ENST00000613073 MRPL44Q9H9J2 332 aaKnown RBP18.43■□□□□ 0.54
CNOT3-208ENST00000613073 SYNRGQ9UMZ2 1314 aa18.43■□□□□ 0.54
CNOT3-208ENST00000613073 NAALADL2Q58DX5 795 aa18.42■□□□□ 0.54
CNOT3-208ENST00000613073 HSP90B2PQ58FF3 399 aa18.42■□□□□ 0.54
CNOT3-208ENST00000613073 PPM1EQ8WY54 764 aa18.42■□□□□ 0.54
CNOT3-208ENST00000613073 CTNND2Q9UQB3 1225 aa18.42■□□□□ 0.54
CNOT3-208ENST00000613073 USP17L10C9JJH3 530 aa18.42■□□□□ 0.54
CNOT3-208ENST00000613073 GTPBP6O43824 516 aaPredicted RBP18.42■□□□□ 0.54
CNOT3-208ENST00000613073 PPP1R11O60927 126 aaPredicted RBP18.42■□□□□ 0.54
CNOT3-208ENST00000613073 TECP42680 631 aa18.42■□□□□ 0.54
CNOT3-208ENST00000613073 CERKLQ49MI3 558 aaPredicted RBP18.42■□□□□ 0.54
CNOT3-208ENST00000613073 RNF216Q9NWF9 866 aaPredicted RBP18.42■□□□□ 0.54
CNOT3-208ENST00000613073 PI4KBQ9UBF8 816 aa18.42■□□□□ 0.54
CNOT3-208ENST00000613073 GDF11O95390 407 aa18.42■□□□□ 0.54
CNOT3-208ENST00000613073 OR52Z1P0C646 297 aa18.42■□□□□ 0.54
CNOT3-208ENST00000613073 ADCY7P51828 1080 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms