RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 PIK3CDO00329 1044 aa16.8■□□□□ 0.28
CIT-219ENST00000612548 POLR2MP0CAP2 368 aa16.8■□□□□ 0.28
CIT-219ENST00000612548 CMA1P23946 247 aa16.8■□□□□ 0.28
CIT-219ENST00000612548 SPECC1Q5M775 1068 aa16.8■□□□□ 0.28
CIT-219ENST00000612548 REPS2Q8NFH8 660 aa16.8■□□□□ 0.28
CIT-219ENST00000612548 TMEM60Q9H2L4 133 aa16.8■□□□□ 0.28
CIT-219ENST00000612548 MYPNQ86TC9 1320 aa16.8■□□□□ 0.28
CIT-219ENST00000612548 UNCXA6NJT0 531 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 EDIL3O43854 480 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 TDP2O95551 362 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 ITGBL1O95965 494 aaPredicted RBP16.79■□□□□ 0.28
CIT-219ENST00000612548 NDUFA8P51970 172 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 RESP18Q5W5W9 173 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 FCHSD1Q86WN1 690 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 C4orf32Q8N8J7 132 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 HOXC10Q9NYD6 342 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 ADAMTS5Q9UNA0 930 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 VWA3AA6NCI4 1184 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 NFIBO00712 420 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 NEMFO60524 1076 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 PFKFB1P16118 471 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 FAM160A1Q05DH4 1040 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 MKRN3Q13064 507 aaKnown RBP16.79■□□□□ 0.28
CIT-219ENST00000612548 TMEM132BQ14DG7 1078 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 MCTP2Q6DN12 878 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 CLEC4DQ8WXI8 215 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 FERMT2Q96AC1 680 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 CSRNP2Q9H175 543 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 DDX19AQ9NUU7 478 aaKnown RBP16.79■□□□□ 0.28
CIT-219ENST00000612548 PNMA2Q9UL42 364 aa16.79■□□□□ 0.28
CIT-219ENST00000612548 A0A0G2JMZ2 1700 aa16.78■□□□□ 0.28
CIT-219ENST00000612548 FOSP01100 380 aaPredicted RBP16.78■□□□□ 0.28
CIT-219ENST00000612548 HOXA7P31268 230 aaPredicted RBP16.78■□□□□ 0.28
CIT-219ENST00000612548 IRX3P78415 501 aaPredicted RBP16.78■□□□□ 0.28
CIT-219ENST00000612548 SNAPC2Q13487 334 aa16.78■□□□□ 0.28
CIT-219ENST00000612548 SNW1Q13573 536 aaKnown RBP16.78■□□□□ 0.28
CIT-219ENST00000612548 MOGSQ13724 837 aa16.78■□□□□ 0.28
CIT-219ENST00000612548 MUM1L1Q5H9M0 696 aa16.78■□□□□ 0.28
CIT-219ENST00000612548 CST9Q5W186 159 aa16.78■□□□□ 0.28
CIT-219ENST00000612548 SNRNP48Q6IEG0 339 aaKnown RBP16.78■□□□□ 0.28
CIT-219ENST00000612548 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
CIT-219ENST00000612548 ENGASEQ8NFI3 743 aa16.78■□□□□ 0.28
CIT-219ENST00000612548 ZNF214Q9UL59 606 aaPredicted RBP16.78■□□□□ 0.28
CIT-219ENST00000612548 AGTPBP1Q9UPW5 1226 aa16.78■□□□□ 0.28
CIT-219ENST00000612548 SYCE3A1L190 88 aa16.77■□□□□ 0.28
CIT-219ENST00000612548 SLC37A4O43826 429 aa16.77■□□□□ 0.28
CIT-219ENST00000612548 OAZ1P54368 228 aa16.77■□□□□ 0.28
CIT-219ENST00000612548 ORC2Q13416 577 aaPredicted RBP16.77■□□□□ 0.28
CIT-219ENST00000612548 IL17AQ16552 155 aa16.77■□□□□ 0.28
CIT-219ENST00000612548 ARL6IP4Q66PJ3 421 aaKnown RBP16.77■□□□□ 0.28
CIT-219ENST00000612548 FASTKD5Q7L8L6 764 aaKnown RBP16.77■□□□□ 0.28
CIT-219ENST00000612548 TEX2Q8IWB9 1127 aa16.77■□□□□ 0.28
CIT-219ENST00000612548 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
CIT-219ENST00000612548 TRERF1Q96PN7 1200 aa16.77■□□□□ 0.28
CIT-219ENST00000612548 NUP62CLQ9H1M0 184 aa16.77■□□□□ 0.28
CIT-219ENST00000612548 RNF146Q9NTX7 359 aa16.77■□□□□ 0.28
CIT-219ENST00000612548 RIPK3Q9Y572 518 aa16.77■□□□□ 0.28
CIT-219ENST00000612548 KINO60870 393 aaKnown RBP16.77■□□□□ 0.27
CIT-219ENST00000612548 OR52Z1P0C646 297 aa16.77■□□□□ 0.27
CIT-219ENST00000612548 SREBF1P36956 1147 aa16.77■□□□□ 0.27
CIT-219ENST00000612548 ARHGAP4P98171 946 aa16.77■□□□□ 0.27
CIT-219ENST00000612548 PLS1Q14651 629 aa16.77■□□□□ 0.27
CIT-219ENST00000612548 CAMK4Q16566 473 aa16.77■□□□□ 0.27
CIT-219ENST00000612548 MCF2L2Q86YR7 1114 aa16.77■□□□□ 0.27
CIT-219ENST00000612548 FMR1NBQ8N0W7 255 aaPredicted RBP16.77■□□□□ 0.27
CIT-219ENST00000612548 ASCC2Q9H1I8 757 aaPredicted RBP16.77■□□□□ 0.27
CIT-219ENST00000612548 CLSTN2Q9H4D0 955 aa16.77■□□□□ 0.27
CIT-219ENST00000612548 GPBP1L1Q9HC44 474 aaPredicted RBP16.77■□□□□ 0.27
CIT-219ENST00000612548 LAD1O00515 517 aa16.76■□□□□ 0.27
CIT-219ENST00000612548 HSD17B4P51659 736 aa16.76■□□□□ 0.27
CIT-219ENST00000612548 PPP4R3AQ6IN85 833 aa16.76■□□□□ 0.27
CIT-219ENST00000612548 GPAT2Q6NUI2 795 aa16.76■□□□□ 0.27
CIT-219ENST00000612548 CRYGNQ8WXF5 182 aa16.76■□□□□ 0.27
CIT-219ENST00000612548 TEX13BQ9BXU2 312 aa16.76■□□□□ 0.27
CIT-219ENST00000612548 FAM13BQ9NYF5 915 aa16.76■□□□□ 0.27
CIT-219ENST00000612548 DDX25Q9UHL0 483 aaKnown RBP16.76■□□□□ 0.27
CIT-219ENST00000612548 HPSEQ9Y251 543 aa16.76■□□□□ 0.27
CIT-219ENST00000612548 FAM237AA0A1B0GTK4 181 aa16.75■□□□□ 0.27
CIT-219ENST00000612548 ATP2A1O14983 1001 aa16.75■□□□□ 0.27
CIT-219ENST00000612548 GCFC2P16383 781 aaKnown RBP16.75■□□□□ 0.27
CIT-219ENST00000612548 SYKP43405 635 aa16.75■□□□□ 0.27
CIT-219ENST00000612548 USP11P51784 963 aa16.75■□□□□ 0.27
CIT-219ENST00000612548 GSE1Q14687 1217 aa16.75■□□□□ 0.27
CIT-219ENST00000612548 CALCRLQ16602 461 aa16.75■□□□□ 0.27
CIT-219ENST00000612548 DTHD1Q6ZMT9 781 aa16.75■□□□□ 0.27
CIT-219ENST00000612548 USP49Q70CQ1 688 aa16.75■□□□□ 0.27
CIT-219ENST00000612548 NAP1L4Q99733 375 aaKnown RBP16.75■□□□□ 0.27
CIT-219ENST00000612548 TNMDQ9H2S6 317 aa16.75■□□□□ 0.27
CIT-219ENST00000612548 PEX10O60683 326 aa16.74■□□□□ 0.27
CIT-219ENST00000612548 PRPHP41219 470 aa16.74■□□□□ 0.27
CIT-219ENST00000612548 HUNKP57058 714 aa16.74■□□□□ 0.27
CIT-219ENST00000612548 PABPC4Q13310 644 aaKnown RBP eCLIP16.74■□□□□ 0.27
CIT-219ENST00000612548 POTEEQ6S8J3 1075 aa16.74■□□□□ 0.27
CIT-219ENST00000612548 NSMFQ6X4W1 530 aa16.74■□□□□ 0.27
CIT-219ENST00000612548 SLC30A10Q6XR72 485 aa16.74■□□□□ 0.27
CIT-219ENST00000612548 LBX2Q6XYB7 198 aa16.74■□□□□ 0.27
CIT-219ENST00000612548 SYMPKQ92797 1274 aaKnown RBP16.74■□□□□ 0.27
CIT-219ENST00000612548 EPSTI1Q96J88 318 aa16.74■□□□□ 0.27
CIT-219ENST00000612548 EHMT1Q9H9B1 1298 aa16.74■□□□□ 0.27
CIT-219ENST00000612548 COL20A1Q9P218 1284 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms