RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 TMTC3Q6ZXV5 915 aa20.96■□□□□ 0.95
SEMA3B-211ENST00000612509 MCF2L2Q86YR7 1114 aa20.96■□□□□ 0.95
SEMA3B-211ENST00000612509 MORC4Q8TE76 937 aa20.96■□□□□ 0.95
SEMA3B-211ENST00000612509 FAM184BQ9ULE4 1060 aa20.96■□□□□ 0.95
SEMA3B-211ENST00000612509 PCDHA1Q9Y5I3 950 aa20.96■□□□□ 0.95
SEMA3B-211ENST00000612509 PNMA6FA0A0J9YX94 578 aa20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 OPLAHO14841 1288 aa20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 COL6A1P12109 1028 aa20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 CASTP20810 708 aaKnown RBP20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 RPS6KB1P23443 525 aa20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 SMARCA1P28370 1054 aa20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 FGD1P98174 961 aa20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 FBXO16Q8IX29 292 aaPredicted RBP20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 SRBD1Q8N5C6 995 aaKnown RBP20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 FANCBQ8NB91 859 aa20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 PIBF1Q8WXW3 757 aa20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 XPNPEP3Q9NQH7 507 aa20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 BRPF3Q9ULD4 1205 aa20.95■□□□□ 0.94
SEMA3B-211ENST00000612509 KLF18A0A0U1RQI7 1052 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 ZBTB43O43298 467 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 ADCY6O43306 1168 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 GHRHRQ02643 423 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 TRAF1Q13077 416 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 CCDC144BQ3MJ40 725 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 GJC2Q5T442 439 aaPredicted RBP20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 Q6ZUG5 572 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 CMTR1Q8N1G2 835 aaKnown RBP20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 ARRDC4Q8NCT1 418 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 DNERQ8NFT8 737 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 SYTL5Q8TDW5 730 aaPredicted RBP20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 TBC1D5Q92609 795 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 RRP36Q96EU6 259 aaKnown RBP20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 COL20A1Q9P218 1284 aa20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 SEC63Q9UGP8 760 aaKnown RBP20.94■□□□□ 0.94
SEMA3B-211ENST00000612509 GOLGA8AA7E2F4 631 aa20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 GOLGA8BA8MQT2 603 aa20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 KBTBD13C9JR72 458 aa20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 RCAN1P53805 252 aa20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 LRRC41Q15345 812 aa20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 RTN1Q16799 776 aa20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 EEPD1Q7L9B9 569 aa20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 VTA1Q9NP79 307 aa20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 RBM28Q9NW13 759 aaKnown RBP20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 CNTNAP5Q8WYK1 1306 aa20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 SYNRGQ9UMZ2 1314 aa20.93■□□□□ 0.94
SEMA3B-211ENST00000612509 ADAMTS4O75173 837 aa20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 PGK1P00558 417 aa20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 CFBP00751 764 aa20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 MYCNP04198 464 aaPredicted RBP20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 EDNRBP24530 442 aa20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 HSD17B4P51659 736 aa20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 PRPF38BQ5VTL8 546 aaKnown RBP20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 DPF3Q92784 378 aa20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 BRF1Q92994 677 aa20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 MPHOSPH6Q99547 160 aaKnown RBP20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 AGXT2Q9BYV1 514 aa20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 NID2Q14112 1375 aa20.92■□□□□ 0.94
SEMA3B-211ENST00000612509 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.91■□□□□ 0.94
SEMA3B-211ENST00000612509 DUSP11O75319 330 aaKnown RBP20.91■□□□□ 0.94
SEMA3B-211ENST00000612509 ADCYAP1R1P41586 468 aa20.91■□□□□ 0.94
SEMA3B-211ENST00000612509 PDE4DQ08499 809 aa20.91■□□□□ 0.94
SEMA3B-211ENST00000612509 APOBRQ0VD83 1088 aa20.91■□□□□ 0.94
SEMA3B-211ENST00000612509 FBXL16Q8N461 479 aa20.91■□□□□ 0.94
SEMA3B-211ENST00000612509 ZSWIM6Q9HCJ5 1215 aa20.91■□□□□ 0.94
SEMA3B-211ENST00000612509 NAP1L2Q9ULW6 460 aaPredicted RBP20.91■□□□□ 0.94
SEMA3B-211ENST00000612509 TAPT1Q6NXT6 567 aa20.9■□□□□ 0.94
SEMA3B-211ENST00000612509 RUFY3Q7L099 469 aa20.9■□□□□ 0.94
SEMA3B-211ENST00000612509 RNF180Q86T96 592 aa20.9■□□□□ 0.94
SEMA3B-211ENST00000612509 CCDC82Q8N4S0 544 aa20.9■□□□□ 0.94
SEMA3B-211ENST00000612509 TAAR1Q96RJ0 339 aa20.9■□□□□ 0.94
SEMA3B-211ENST00000612509 TM6SF1Q9BZW5 370 aa20.9■□□□□ 0.94
SEMA3B-211ENST00000612509 PDGFCQ9NRA1 345 aa20.9■□□□□ 0.94
SEMA3B-211ENST00000612509 B4DLN1 442 aa20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 EIF5BO60841 1220 aaKnown RBP20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 METAP2P50579 478 aaKnown RBP eCLIP20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 MRPL12P52815 198 aaKnown RBP20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 TNFAIP2Q03169 654 aa20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 SAMD3Q8N6K7 520 aa20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 NSUN6Q8TEA1 469 aaKnown RBP20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 RMDN3Q96TC7 470 aa20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 SENP6Q9GZR1 1112 aaPredicted RBP20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 UPF3AQ9H1J1 476 aaKnown RBP20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 MAP3K20Q9NYL2 800 aaKnown RBP20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 CYP46A1Q9Y6A2 500 aa20.89■□□□□ 0.93
SEMA3B-211ENST00000612509 hCG_1642624A0A1W2PR95 340 aa20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 MYADML2A6NDP7 307 aa20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 GCOM1H8Y6P7 765 aaPredicted RBP20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 EVI5O60447 810 aa20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 POLR2MP0CAP2 368 aa20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 SMPD1P17405 629 aa20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 HOXA13P31271 388 aaPredicted RBP20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 TLK2Q86UE8 772 aa20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 UPF3BQ9BZI7 483 aaKnown RBP20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 PXMP2Q9NR77 195 aa20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 FAM217BQ9NTX9 383 aaPredicted RBP20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 PHF24Q9UPV7 400 aa20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 GNEQ9Y223 722 aaKnown RBP20.88■□□□□ 0.93
SEMA3B-211ENST00000612509 KIAA1217Q5T5P2 1943 aa20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 C6orf222P0C671 652 aaPredicted RBP20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 EIF2AK2P19525 551 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms