RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CPVLQ9H3G5 476 aa14.31□□□□□ -0.12
CBWD3-208ENST00000612050 MAP3K20Q9NYL2 800 aaKnown RBP14.31□□□□□ -0.12
CBWD3-208ENST00000612050 MAD2L2Q9UI95 211 aa14.31□□□□□ -0.12
CBWD3-208ENST00000612050 ADCYAP1R1P41586 468 aa14.3□□□□□ -0.12
CBWD3-208ENST00000612050 MNX1P50219 401 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-208ENST00000612050 ATN1P54259 1190 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-208ENST00000612050 STAG2Q8N3U4 1231 aa14.3□□□□□ -0.12
CBWD3-208ENST00000612050 CLEC4DQ8WXI8 215 aa14.3□□□□□ -0.12
CBWD3-208ENST00000612050 RRP36Q96EU6 259 aaKnown RBP14.3□□□□□ -0.12
CBWD3-208ENST00000612050 GLT1D1Q96MS3 346 aa14.3□□□□□ -0.12
CBWD3-208ENST00000612050 LBHD1Q9BQE6 289 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-208ENST00000612050 LY9Q9HBG7 655 aa14.3□□□□□ -0.12
CBWD3-208ENST00000612050 PCDHA1Q9Y5I3 950 aa14.3□□□□□ -0.12
CBWD3-208ENST00000612050 SMCHD1A6NHR9 2005 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 SYNRGQ9UMZ2 1314 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 BRCA2P51587 3418 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 SH2B2O14492 632 aaPredicted RBP14.29□□□□□ -0.12
CBWD3-208ENST00000612050 CFBP00751 764 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 ANTXR2P58335 489 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 TROAPQ12815 778 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 GNASQ5JWF2 1037 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 SLC30A10Q6XR72 485 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 EEPD1Q7L9B9 569 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 NSUN6Q8TEA1 469 aaKnown RBP14.29□□□□□ -0.12
CBWD3-208ENST00000612050 STARD7Q9NQZ5 370 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 PHF24Q9UPV7 400 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 ATP11BQ9Y2G3 1177 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 TAF6LQ9Y6J9 622 aa14.29□□□□□ -0.12
CBWD3-208ENST00000612050 MROH7Q68CQ1 1323 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 PNMA6FA0A0J9YX94 578 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 PSMA5P28066 241 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 SMARCA1P28370 1054 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 RTP1P59025 263 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 LRRC26Q2I0M4 334 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 ARHGEF16Q5VV41 709 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 CHRDL2Q6WN34 429 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 SLC39A5Q6ZMH5 540 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 DHX32Q7L7V1 743 aaKnown RBP14.28□□□□□ -0.12
CBWD3-208ENST00000612050 TLK2Q86UE8 772 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 FBXO16Q8IX29 292 aaPredicted RBP14.28□□□□□ -0.12
CBWD3-208ENST00000612050 CUL5Q93034 780 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 FERMT2Q96AC1 680 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 FGD4Q96M96 766 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 IWS1Q96ST2 819 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 RIOX1Q9H6W3 641 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 Q9Y3F1 56 aa14.28□□□□□ -0.12
CBWD3-208ENST00000612050 NKRFO15226 690 aaKnown RBP eCLIP14.27□□□□□ -0.12
CBWD3-208ENST00000612050 EPB41L2O43491 1005 aaKnown RBP14.27□□□□□ -0.12
CBWD3-208ENST00000612050 ADAMTS4O75173 837 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 CST5P28325 142 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-208ENST00000612050 ACLYP53396 1101 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 GJA9P57773 515 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 PPP2R5BQ15173 497 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 STXBP2Q15833 593 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 TSGA10IPQ3SY00 556 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 MORC4Q8TE76 937 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 SCFD2Q8WU76 684 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 PIGSQ96S52 555 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 RMDN3Q96TC7 470 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 SPZ1Q9BXG8 430 aa14.27□□□□□ -0.12
CBWD3-208ENST00000612050 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-208ENST00000612050 RBM28Q9NW13 759 aaKnown RBP14.27□□□□□ -0.12
CBWD3-208ENST00000612050 ZMYND8Q9ULU4 1186 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-208ENST00000612050 NAP1L2Q9ULW6 460 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-208ENST00000612050 ALPK3Q96L96 1907 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 A0A1W2PQ45 241 aaPredicted RBP14.26□□□□□ -0.13
CBWD3-208ENST00000612050 A0A1W2PQY0 241 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 GCOM1H8Y6P7 765 aaPredicted RBP14.26□□□□□ -0.13
CBWD3-208ENST00000612050 CABYRO75952 493 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 POLR2MP0CAP2 368 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 CPT1AP50416 773 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 TTLL4Q14679 1199 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 KCNA10Q16322 511 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 BLOC1S2Q6QNY1 142 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 MICU3Q86XE3 530 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 MTMR8Q96EF0 704 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 WDR11Q9BZH6 1224 aa14.26□□□□□ -0.13
CBWD3-208ENST00000612050 PRDM5Q9NQX1 630 aaPredicted RBP14.26□□□□□ -0.13
CBWD3-208ENST00000612050 A0A1W2PPC1 479 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 DCDC2CA8MYV0 355 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 TLR3O15455 904 aaKnown RBP14.25□□□□□ -0.13
CBWD3-208ENST00000612050 DYNC1LI2O43237 492 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-208ENST00000612050 ZBTB43O43298 467 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 ASGR1P07306 291 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 SYN1P17600 705 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 C1orf53Q5VUE5 145 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 SGMS1Q86VZ5 419 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 SYTL5Q8TDW5 730 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-208ENST00000612050 PIBF1Q8WXW3 757 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 LENG1Q96BZ8 264 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-208ENST00000612050 MYL10Q9BUA6 226 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 SEZ6LQ9BYH1 1024 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 KATNBL1Q9H079 304 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 UPF3AQ9H1J1 476 aaKnown RBP14.25□□□□□ -0.13
CBWD3-208ENST00000612050 SENP2Q9HC62 589 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 COLQQ9Y215 455 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-208ENST00000612050 LRRC37A2A6NM11 1700 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 ELP1O95163 1332 aa14.25□□□□□ -0.13
CBWD3-208ENST00000612050 CCDC196A0A1B0GTZ2 297 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 HSPA4P34932 840 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms