RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 YEATS4O95619 227 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 MBD3O95983 291 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 VCAM1P19320 739 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 MARCKSP29966 332 aaPredicted RBP9.26□□□□□ -0.93
TARDBP-213ENST00000611963 GJA5P36382 358 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 ME1P48163 572 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 TM4SF4P48230 202 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 ADCY7P51828 1080 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 PTPAQ15257 358 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 SF3A1Q15459 793 aaKnown RBP9.26□□□□□ -0.93
TARDBP-213ENST00000611963 CAVIN1Q6NZI2 390 aaKnown RBP9.26□□□□□ -0.93
TARDBP-213ENST00000611963 CCDC174Q6PII3 467 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 PIK3AP1Q6ZUJ8 805 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 ZNF713Q8N859 430 aaPredicted RBP9.26□□□□□ -0.93
TARDBP-213ENST00000611963 LINC00301Q8NCQ3 95 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 ZNF280CQ8ND82 737 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 CCDC12Q8WUD4 166 aaPredicted RBP9.26□□□□□ -0.93
TARDBP-213ENST00000611963 CHURC1Q8WUH1 139 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 KIFC2Q96AC6 838 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 ZMYND12Q9H0C1 365 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 AS3MTQ9HBK9 375 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 TMEM260Q9NX78 707 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 FEM1BQ9UK73 627 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 PCDHA6Q9UN73 950 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 PCDHB6Q9Y5E3 794 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 PCDHA8Q9Y5H6 950 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 CASP8AP2Q9UKL3 1982 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 LOC285556D6RIA3 1793 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 RBBP6Q7Z6E9 1792 aaKnown RBP9.25□□□□□ -0.93
TARDBP-213ENST00000611963 CCDC194A0A1B0GVG4 234 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 ESYT2A0FGR8 921 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 WDR46O15213 610 aaKnown RBP9.25□□□□□ -0.93
TARDBP-213ENST00000611963 NUDT7P0C024 238 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 LIG1P18858 919 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 IREB2P48200 963 aaKnown RBP9.25□□□□□ -0.93
TARDBP-213ENST00000611963 HMGCS2P54868 508 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 BACE1P56817 501 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 ZNF174Q15697 407 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 UBE2SQ16763 222 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 USH1GQ495M9 461 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 RILPL1Q5EBL4 403 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 PPP1R15BQ5SWA1 713 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 JAKMIP3Q5VZ66 844 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 GALNT17Q6IS24 598 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 PPP1R18Q6NYC8 613 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 FAM160B2Q86V87 743 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 FBXO11Q86XK2 927 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 FAM177A1Q8N128 213 aaPredicted RBP9.25□□□□□ -0.93
TARDBP-213ENST00000611963 BICD2Q8TD16 824 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 LPAR1Q92633 364 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 SLC10A4Q96EP9 437 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 WNK4Q96J92 1243 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 TANGO6Q9C0B7 1094 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 RPAP3Q9H6T3 665 aaPredicted RBP9.25□□□□□ -0.93
TARDBP-213ENST00000611963 ELP3Q9H9T3 547 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 C6orf50Q9HD87 102 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 TMEM63CQ9P1W3 806 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 BIN2Q9UBW5 565 aaPredicted RBP9.25□□□□□ -0.93
TARDBP-213ENST00000611963 NOL7Q9UMY1 257 aaKnown RBP9.25□□□□□ -0.93
TARDBP-213ENST00000611963 PCDHA7Q9UN72 937 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 PCDHA1Q9Y5I3 950 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 CSADQ9Y600 493 aa9.25□□□□□ -0.93
TARDBP-213ENST00000611963 GOLGA6L4A6NEF3 574 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 UNCXA6NJT0 531 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 PLA2G6O60733 806 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 GNA11P29992 359 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 USP14P54578 494 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 SLC39A14Q15043 492 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 INF2Q27J81 1249 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 TTC38Q5R3I4 469 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 KRT25Q7Z3Z0 450 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 ANKRD13AQ8IZ07 590 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 REXO1Q8N1G1 1221 aaKnown RBP9.24□□□□□ -0.93
TARDBP-213ENST00000611963 FSIP1Q8NA03 581 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 KCNG4Q8TDN1 519 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 ABHD8Q96I13 439 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 SLF1Q9BQI6 1058 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 AMNQ9BXJ7 453 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 RANBP17Q9H2T7 1088 aaKnown RBP9.24□□□□□ -0.93
TARDBP-213ENST00000611963 R3HDMLQ9H3Y0 253 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 GOLPH3LQ9H4A5 285 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 RIC8AQ9NPQ8 531 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 AFG3L2Q9Y4W6 797 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 PCDHGA4Q9Y5G9 962 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 MRVI1Q9Y6F6 885 aa9.24□□□□□ -0.93
TARDBP-213ENST00000611963 FLOT1O75955 427 aa9.23□□□□□ -0.93
TARDBP-213ENST00000611963 TBC1D8O95759 1140 aa9.23□□□□□ -0.93
TARDBP-213ENST00000611963 ZBTB48P10074 688 aaPredicted RBP9.23□□□□□ -0.93
TARDBP-213ENST00000611963 MCM7P33993 719 aa9.23□□□□□ -0.93
TARDBP-213ENST00000611963 AXDND1Q5T1B0 1012 aaPredicted RBP9.23□□□□□ -0.93
TARDBP-213ENST00000611963 CCAR1Q8IX12 1150 aaKnown RBP9.23□□□□□ -0.93
TARDBP-213ENST00000611963 CUL5Q93034 780 aa9.23□□□□□ -0.93
TARDBP-213ENST00000611963 C12orf42Q96LP6 360 aa9.23□□□□□ -0.93
TARDBP-213ENST00000611963 CLIC6Q96NY7 704 aa9.23□□□□□ -0.93
TARDBP-213ENST00000611963 HS3ST6Q96QI5 342 aa9.23□□□□□ -0.93
TARDBP-213ENST00000611963 MCOLN1Q9GZU1 580 aa9.23□□□□□ -0.93
TARDBP-213ENST00000611963 PSTPIP2Q9H939 334 aa9.23□□□□□ -0.93
TARDBP-213ENST00000611963 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms