RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 USP8P40818 1118 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 NOX5Q96PH1 765 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 MRPL44Q9H9J2 332 aaKnown RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 KCND1Q9NSA2 647 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 ABHD10Q9NUJ1 306 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 DDX25Q9UHL0 483 aaKnown RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 A0A1W2PQC6 194 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 NT5DC1Q5TFE4 455 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 CDKAL1Q5VV42 579 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 GUF1Q8N442 669 aaKnown RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 MB21D1Q8N884 522 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 FLAD1Q8NFF5 587 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 ZMYND12Q9H0C1 365 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 DBNDD1Q9H9R9 158 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 MYO6Q9UM54 1294 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 PCDHA6Q9UN73 950 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 PCDHA8Q9Y5H6 950 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 RIMS1Q86UR5 1692 aaKnown RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 ESYT2A0FGR8 921 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 PALM3A6NDB9 673 aaPredicted RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 H0YIN7 160 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 TRIM37O94972 964 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 SEC31AO94979 1220 aaKnown RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 MMP10P09238 476 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 CYP4A11Q02928 519 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 FUT2Q10981 343 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 REXO1L1PQ8IX06 675 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 MTMR4Q9NYA4 1195 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 KDM3AQ9Y4C1 1321 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 PPP1R3GB7ZBB8 358 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 TDP2O95551 362 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 OAS2P29728 719 aaKnown RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 CACNB3P54284 484 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 ORC2Q13416 577 aaPredicted RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 ADAM9Q13443 819 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 IFI16Q16666 785 aaKnown RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 VWA3BQ502W6 1294 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 DCAF17Q5H9S7 520 aaPredicted RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 CLEC10AQ8IUN9 316 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 GDAP1L1Q96MZ0 367 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 TRERF1Q96PN7 1200 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 VPS18Q9P253 973 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 FLT1P17948 1338 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 PNMA6FA0A0J9YX94 578 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 CHMP2AO43633 222 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 RHOBTB3O94955 611 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 CCDC172P0C7W6 258 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 TCP1P17987 556 aaKnown RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 USH1GQ495M9 461 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 MCTP2Q6DN12 878 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 SMCR8Q8TEV9 937 aaPredicted RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 SH2D4AQ9H788 454 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 MORC2Q9Y6X9 1032 aaPredicted RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 FAM205AQ6ZU69 1335 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 KDM4FA0A1W2PPD8 638 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 CD44P16070 742 aaKnown RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 PABPC4Q13310 644 aaKnown RBP eCLIP7.07□□□□□ -1.28
SNX13-213ENST00000611725 TERF2Q15554 542 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 UBE2SQ16763 222 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 UNC13DQ70J99 1090 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 KCTD1Q719H9 257 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 GJD4Q96KN9 370 aaPredicted RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 ANO3Q9BYT9 981 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 EPC1Q9H2F5 836 aa7.07□□□□□ -1.28
SNX13-213ENST00000611725 QTRT2Q9H974 415 aaKnown RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 USP17L15C9J2P7 530 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 USP17L13C9JLJ4 530 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 USP17L11C9JVI0 530 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 USP17L18D6R9N7 530 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 USP17L22D6RA61 530 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 USP17L17D6RBQ6 530 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 USP17L19D6RCP7 530 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 USP17L20D6RJB6 530 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 ZBTB5O15062 677 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 USP17L24Q0WX57 530 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 RBM26Q5T8P6 1007 aaKnown RBP7.06□□□□□ -1.28
SNX13-213ENST00000611725 USP17L6PQ6QN14 398 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 SH3RF1Q7Z6J0 888 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 GIMAP8Q8ND71 665 aaPredicted RBP7.06□□□□□ -1.28
SNX13-213ENST00000611725 NKX2-3Q8TAU0 364 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 TSGA10Q9BZW7 698 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 ERLIN2O94905 339 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 GYPCP04921 128 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 VEGFAP15692 232 aaPredicted RBP7.06□□□□□ -1.28
SNX13-213ENST00000611725 SFMBT2Q5VUG0 894 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 CC2D2BQ6DHV5 1058 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 FBXO11Q86XK2 927 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 CCDC170Q8IYT3 715 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 FNBP4Q8N3X1 1017 aaPredicted RBP7.06□□□□□ -1.28
SNX13-213ENST00000611725 CNKSR1Q969H4 720 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 APBA3O96018 575 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 KRT13P13646 458 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 CACNB1Q02641 598 aaPredicted RBP7.06□□□□□ -1.28
SNX13-213ENST00000611725 LRRC63Q05C16 580 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 C8orf74Q6P047 294 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 LARGE2Q8N3Y3 721 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 DDX12PQ92771 950 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 ATRNO75882 1429 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 A0A087X0B3 334 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 FAM196BA6NMK8 535 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms