RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 B4E1Z4 1266 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 TIMP1P01033 207 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 ALDH5A1P51649 535 aaPredicted RBP25.43■■□□□ 1.66
CBWD3-207ENST00000611426 EPHB4P54760 987 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 CXCL17Q6UXB2 119 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 RNF207Q6ZRF8 634 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 PNMA1Q8ND90 353 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 FAM161BQ96MY7 647 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 ZSCAN10Q96SZ4 725 aaPredicted RBP25.43■■□□□ 1.66
CBWD3-207ENST00000611426 KAT14Q9H8E8 782 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 TBX21Q9UL17 535 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 Q9Y3F1 56 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 LOC102724159A0A0B4J2E5 919 aa25.42■■□□□ 1.66
CBWD3-207ENST00000611426 TLR3O15455 904 aaKnown RBP25.42■■□□□ 1.66
CBWD3-207ENST00000611426 ZEB2O60315 1214 aa25.42■■□□□ 1.66
CBWD3-207ENST00000611426 PTGS1P23219 599 aa25.42■■□□□ 1.66
CBWD3-207ENST00000611426 PWP2Q15269 919 aaKnown RBP25.42■■□□□ 1.66
CBWD3-207ENST00000611426 ZNF697Q5TEC3 545 aa25.42■■□□□ 1.66
CBWD3-207ENST00000611426 RNPC3Q96LT9 517 aaKnown RBP25.42■■□□□ 1.66
CBWD3-207ENST00000611426 UBA5Q9GZZ9 404 aa25.42■■□□□ 1.66
CBWD3-207ENST00000611426 ZSWIM5Q9P217 1185 aa25.42■■□□□ 1.66
CBWD3-207ENST00000611426 LRRC37A2A6NM11 1700 aa25.41■■□□□ 1.66
CBWD3-207ENST00000611426 WDR19Q8NEZ3 1342 aa25.41■■□□□ 1.66
CBWD3-207ENST00000611426 CABYRO75952 493 aa25.41■■□□□ 1.66
CBWD3-207ENST00000611426 TMEM63BQ5T3F8 832 aa25.41■■□□□ 1.66
CBWD3-207ENST00000611426 SLC30A10Q6XR72 485 aa25.41■■□□□ 1.66
CBWD3-207ENST00000611426 ANKS1AQ92625 1134 aa25.41■■□□□ 1.66
CBWD3-207ENST00000611426 CPVLQ9H3G5 476 aa25.41■■□□□ 1.66
CBWD3-207ENST00000611426 SEC24BO95487 1268 aa25.4■■□□□ 1.66
CBWD3-207ENST00000611426 RPS6P62753 249 aaKnown RBP25.4■■□□□ 1.66
CBWD3-207ENST00000611426 SMAD3P84022 425 aaKnown RBP25.4■■□□□ 1.66
CBWD3-207ENST00000611426 MFSD5Q6N075 450 aa25.4■■□□□ 1.66
CBWD3-207ENST00000611426 FAM126BQ8IXS8 530 aa25.4■■□□□ 1.66
CBWD3-207ENST00000611426 MPHOSPH6Q99547 160 aaKnown RBP25.4■■□□□ 1.66
CBWD3-207ENST00000611426 KRT23Q9C075 422 aa25.4■■□□□ 1.66
CBWD3-207ENST00000611426 USH1GQ495M9 461 aa25.39■■□□□ 1.65
CBWD3-207ENST00000611426 DUSP28Q4G0W2 176 aa25.39■■□□□ 1.65
CBWD3-207ENST00000611426 ENAHQ8N8S7 591 aaPredicted RBP25.39■■□□□ 1.65
CBWD3-207ENST00000611426 WDR11Q9BZH6 1224 aa25.39■■□□□ 1.65
CBWD3-207ENST00000611426 CNNM2Q9H8M5 875 aa25.39■■□□□ 1.65
CBWD3-207ENST00000611426 ITGA7Q13683 1181 aa25.38■■□□□ 1.65
CBWD3-207ENST00000611426 GUCD1Q96NT3 240 aa25.38■■□□□ 1.65
CBWD3-207ENST00000611426 TNKSO95271 1327 aa25.38■■□□□ 1.65
CBWD3-207ENST00000611426 PDE4DQ08499 809 aa25.37■■□□□ 1.65
CBWD3-207ENST00000611426 ASPRV1Q53RT3 343 aa25.37■■□□□ 1.65
CBWD3-207ENST00000611426 SLC43A3Q8NBI5 491 aa25.37■■□□□ 1.65
CBWD3-207ENST00000611426 UBAC1Q9BSL1 405 aa25.37■■□□□ 1.65
CBWD3-207ENST00000611426 IL25Q9H293 177 aa25.37■■□□□ 1.65
CBWD3-207ENST00000611426 UPF2Q9HAU5 1272 aaKnown RBP25.37■■□□□ 1.65
CBWD3-207ENST00000611426 RBM47A0AV96 593 aaKnown RBP25.36■■□□□ 1.65
CBWD3-207ENST00000611426 CD4P01730 458 aa25.36■■□□□ 1.65
CBWD3-207ENST00000611426 CDC37Q16543 378 aaPredicted RBP25.36■■□□□ 1.65
CBWD3-207ENST00000611426 ADGRF4Q8IZF3 695 aa25.36■■□□□ 1.65
CBWD3-207ENST00000611426 TMEM199Q8N511 208 aa25.36■■□□□ 1.65
CBWD3-207ENST00000611426 RGS22Q8NE09 1264 aa25.36■■□□□ 1.65
CBWD3-207ENST00000611426 DNERQ8NFT8 737 aa25.36■■□□□ 1.65
CBWD3-207ENST00000611426 SEZ6LQ9BYH1 1024 aa25.36■■□□□ 1.65
CBWD3-207ENST00000611426 PPP1R12CQ9BZL4 782 aa25.36■■□□□ 1.65
CBWD3-207ENST00000611426 A0A0C4DFX4 3053 aa25.36■■□□□ 1.65
CBWD3-207ENST00000611426 B4DLN1 442 aa25.35■■□□□ 1.65
CBWD3-207ENST00000611426 PARP1P09874 1014 aaKnown RBP25.35■■□□□ 1.65
CBWD3-207ENST00000611426 ANP32AP39687 249 aaKnown RBP25.35■■□□□ 1.65
CBWD3-207ENST00000611426 MRPL12P52815 198 aaKnown RBP25.35■■□□□ 1.65
CBWD3-207ENST00000611426 PPIGQ13427 754 aaKnown RBP eCLIP25.35■■□□□ 1.65
CBWD3-207ENST00000611426 SEMA6BQ9H3T3 888 aa25.35■■□□□ 1.65
CBWD3-207ENST00000611426 GRIN2DO15399 1336 aa25.35■■□□□ 1.65
CBWD3-207ENST00000611426 DHX16O60231 1041 aaKnown RBP25.34■■□□□ 1.65
CBWD3-207ENST00000611426 PSMC6P62333 389 aa25.34■■□□□ 1.65
CBWD3-207ENST00000611426 RUFY2Q8WXA3 655 aa25.34■■□□□ 1.65
CBWD3-207ENST00000611426 TBC1D32Q96NH3 1257 aa25.34■■□□□ 1.65
CBWD3-207ENST00000611426 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.34■■□□□ 1.65
CBWD3-207ENST00000611426 VAT1LQ9HCJ6 419 aa25.34■■□□□ 1.65
CBWD3-207ENST00000611426 ABCB11O95342 1321 aa25.34■■□□□ 1.65
CBWD3-207ENST00000611426 CSF2RAP15509 400 aa25.33■■□□□ 1.65
CBWD3-207ENST00000611426 EDNRBP24530 442 aa25.33■■□□□ 1.65
CBWD3-207ENST00000611426 IFIT1BQ5T764 474 aaKnown RBP25.33■■□□□ 1.65
CBWD3-207ENST00000611426 OR6J1Q8NGC5 347 aa25.33■■□□□ 1.65
CBWD3-207ENST00000611426 POLR3EQ9NVU0 708 aa25.33■■□□□ 1.65
CBWD3-207ENST00000611426 CYP2C18P33260 490 aa25.32■■□□□ 1.64
CBWD3-207ENST00000611426 CPT1AP50416 773 aa25.32■■□□□ 1.64
CBWD3-207ENST00000611426 CASC1Q6TDU7 716 aa25.32■■□□□ 1.64
CBWD3-207ENST00000611426 C16orf59Q7L2K0 433 aa25.32■■□□□ 1.64
CBWD3-207ENST00000611426 MAF1Q9H063 256 aa25.32■■□□□ 1.64
CBWD3-207ENST00000611426 RAD50Q92878 1312 aa25.32■■□□□ 1.64
CBWD3-207ENST00000611426 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-207ENST00000611426 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-207ENST00000611426 TRDNQ13061 729 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 PPP2R5BQ15173 497 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 QRICH1Q2TAL8 776 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 SCFD2Q8WU76 684 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 TBC1D5Q92609 795 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 CDX2Q99626 313 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-207ENST00000611426 TRPV6Q9H1D0 765 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 HIPK3Q9H422 1215 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 GPHNQ9NQX3 736 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-207ENST00000611426 NKRFO15226 690 aaKnown RBP eCLIP25.31■■□□□ 1.64
CBWD3-207ENST00000611426 MYL3P08590 195 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 CHMLP26374 656 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 BRDTQ58F21 947 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-207ENST00000611426 TMEM240Q5SV17 173 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms