RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 PDE4DQ08499 809 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 ERCC6LQ2NKX8 1250 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
PABPC1-224ENST00000610907 APOBEC3HQ6NTF7 200 aaKnown RBP11.7□□□□□ -0.54
PABPC1-224ENST00000610907 ADGRF4Q8IZF3 695 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 OR8K1Q8NGG5 319 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 MKL1Q969V6 931 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 ZDHHC15Q96MV8 337 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 MMTAG2Q9BU76 263 aaKnown RBP11.7□□□□□ -0.54
PABPC1-224ENST00000610907 MRFAP1Q9Y605 127 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 MYH8P13535 1937 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 FRMPD2Q68DX3 1309 aaPredicted RBP11.69□□□□□ -0.54
PABPC1-224ENST00000610907 ZBTB5O15062 677 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 FANCGO15287 622 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 FGFR1OPO95684 399 aaKnown RBP11.69□□□□□ -0.54
PABPC1-224ENST00000610907 KRT9P35527 623 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 TXKP42681 527 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 ASIC1P78348 528 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 PSMD2Q13200 908 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 MTF1Q14872 753 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 SEPT2Q15019 361 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 FBXO38Q6PIJ6 1188 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 LRRC47Q8N1G4 583 aaKnown RBP11.69□□□□□ -0.54
PABPC1-224ENST00000610907 CSGALNACT2Q8N6G5 542 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 CUL5Q93034 780 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 WDR24Q96S15 920 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 DNAJC7Q99615 494 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 DUSP9Q99956 384 aaKnown RBP11.69□□□□□ -0.54
PABPC1-224ENST00000610907 DESI2Q9BSY9 194 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 IDI2Q9BXS1 227 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 MRPL44Q9H9J2 332 aaKnown RBP11.69□□□□□ -0.54
PABPC1-224ENST00000610907 CAPN11Q9UMQ6 739 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 MAPK8IP1Q9UQF2 711 aa11.69□□□□□ -0.54
PABPC1-224ENST00000610907 LUC7L2Q9Y383 392 aaKnown RBP11.69□□□□□ -0.54
PABPC1-224ENST00000610907 ABCB11O95342 1321 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 GREB1LQ9C091 1923 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-224ENST00000610907 ATP8B1O43520 1251 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 CRKP46108 304 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 GRB10Q13322 594 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 BMS1Q14692 1282 aaKnown RBP11.68□□□□□ -0.54
PABPC1-224ENST00000610907 ARHGAP29Q52LW3 1261 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 FIGNQ5HY92 759 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 STRIP1Q5VSL9 837 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 KRT79Q5XKE5 535 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 CENPPQ6IPU0 288 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 ZNF662Q6ZS27 426 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 UNC13DQ70J99 1090 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 COL23A1Q86Y22 540 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-224ENST00000610907 GPR161Q8N6U8 529 aaKnown RBP11.68□□□□□ -0.54
PABPC1-224ENST00000610907 DCAF4Q8WV16 495 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 COA7Q96BR5 231 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 CDK5RAP3Q96JB5 506 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 PLIN2Q99541 437 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 CARD6Q9BX69 1037 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 GPCPD1Q9NPB8 672 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 TMEM260Q9NX78 707 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 FAM53CQ9NYF3 392 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 NYAP2Q9P242 653 aa11.68□□□□□ -0.54
PABPC1-224ENST00000610907 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.68□□□□□ -0.54
PABPC1-224ENST00000610907 V9GYY5 206 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-224ENST00000610907 TRIM49BA6NDI0 452 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 F8W031 263 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-224ENST00000610907 PMS1P54277 932 aaKnown RBP11.67□□□□□ -0.54
PABPC1-224ENST00000610907 CBX1P83916 185 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 STK4Q13043 487 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 ZNF772Q68DY9 489 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-224ENST00000610907 TEX2Q8IWB9 1127 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 ZSCAN29Q8IWY8 852 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-224ENST00000610907 GUF1Q8N442 669 aaKnown RBP11.67□□□□□ -0.54
PABPC1-224ENST00000610907 LRRC15Q8TF66 581 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 LARP4BQ92615 738 aaKnown RBP11.67□□□□□ -0.54
PABPC1-224ENST00000610907 RABGGTAQ92696 567 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 TUBGCP2Q9BSJ2 902 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 KANSL2Q9H9L4 492 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 BLOC1S4Q9NUP1 217 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 PI4KBQ9UBF8 816 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 BRWD3Q6RI45 1802 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 A0A1W2PQJ5 194 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 EDIL3O43854 480 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 COBLO75128 1261 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 USP11P51784 963 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 ERVK-24P63145 666 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 PPP2R3AQ06190 1150 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 TMEM119Q4V9L6 283 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 HYIQ5T013 277 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 ANKRD40Q6AI12 368 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 STYK1Q6J9G0 422 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 MOXD1Q6UVY6 613 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 RSRC2Q7L4I2 434 aaKnown RBP11.67□□□□□ -0.54
PABPC1-224ENST00000610907 CREBRFQ8IUR6 639 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 CEP112Q8N8E3 955 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 RAD54LQ92698 747 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 PNMA5Q96PV4 448 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 ERGIC2Q96RQ1 377 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 NT5C3AQ9H0P0 336 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 PSTPIP2Q9H939 334 aa11.67□□□□□ -0.54
PABPC1-224ENST00000610907 LZTFL1Q9NQ48 299 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms