RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 PBX1P40424 430 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 PRCPP42785 496 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 USP11P51784 963 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 CACNB3P54284 484 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 STX17P56962 302 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 AP3B2Q13367 1082 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 KMT5BQ4FZB7 885 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
USP6NL-206ENST00000609853 FKBP1CQ5VVH2 108 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 RSBN1LQ6PCB5 846 aaPredicted RBP13.43□□□□□ -0.26
USP6NL-206ENST00000609853 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 KCTD1Q719H9 257 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 PPFIBP1Q86W92 1011 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 CCDC51Q96ER9 411 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 PPP1R13BQ96KQ4 1090 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 BAG1Q99933 345 aaPredicted RBP13.43□□□□□ -0.26
USP6NL-206ENST00000609853 TRIM9Q9C026 710 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
USP6NL-206ENST00000609853 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
USP6NL-206ENST00000609853 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.43□□□□□ -0.26
USP6NL-206ENST00000609853 MYH7BA7E2Y1 1941 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 BICDL2A1A5D9 508 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 AKR1B15C9JRZ8 316 aaPredicted RBP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 CTIFO43310 598 aaKnown RBP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 RRP9O43818 475 aaKnown RBP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 EEF1GP26641 437 aaKnown RBP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 TXKP42681 527 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 TRIM14Q14142 442 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 HSP90AA4PQ58FG1 418 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 CNNM4Q6P4Q7 775 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 SV2BQ7L1I2 683 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 TC2NQ8N9U0 490 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 THAP9Q9H5L6 903 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 TDRD3Q9H7E2 651 aaKnown RBP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 TRMT1Q9NXH9 659 aaKnown RBP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 PVALEFA0A1B0GWK0 134 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 YDJCA8MPS7 323 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 F5H6K3 240 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 C21orf2O43822 256 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 VIL1P09327 827 aaKnown RBP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 SLC16A2P36021 539 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 TNNI2P48788 182 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 KLRC3Q07444 240 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 SEPT2Q15019 361 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 QRICH1Q2TAL8 776 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 TCP11X2Q5H9J9 407 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 KRT79Q5XKE5 535 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 BTNL9Q6UXG8 535 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 TMEM139Q8IV31 216 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 CNGA4Q8IV77 575 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 OGFOD1Q8N543 542 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 UPF1Q92900 1129 aaKnown RBP eCLIP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 PRMT6Q96LA8 375 aaPredicted RBP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 MMTAG2Q9BU76 263 aaKnown RBP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 AMNQ9BXJ7 453 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 EXOC1Q9NV70 894 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 DDX25Q9UHL0 483 aaKnown RBP13.42□□□□□ -0.26
USP6NL-206ENST00000609853 PCDHA1Q9Y5I3 950 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 PCDHAC2Q9Y5I4 1007 aa13.42□□□□□ -0.26
USP6NL-206ENST00000609853 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 KCNJ18B7U540 433 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 FOSP01100 380 aaPredicted RBP13.41□□□□□ -0.26
USP6NL-206ENST00000609853 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 CYP3A7P24462 503 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 MMP14P50281 582 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 KCNJ12Q14500 433 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 KRT31Q15323 416 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 CDC37Q16543 378 aaPredicted RBP13.41□□□□□ -0.26
USP6NL-206ENST00000609853 SIAH1Q8IUQ4 282 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 FAM151AQ8WW52 585 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 CSRNP1Q96S65 589 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 GDAQ9Y2T3 454 aa13.41□□□□□ -0.26
USP6NL-206ENST00000609853 N4BP3O15049 544 aa13.4□□□□□ -0.26
USP6NL-206ENST00000609853 SLC37A4O43826 429 aa13.4□□□□□ -0.26
USP6NL-206ENST00000609853 TDP2O95551 362 aa13.4□□□□□ -0.26
USP6NL-206ENST00000609853 BAG6P46379 1132 aa13.4□□□□□ -0.26
USP6NL-206ENST00000609853 COPB1P53618 953 aaKnown RBP13.4□□□□□ -0.26
USP6NL-206ENST00000609853 SF3B2Q13435 895 aaKnown RBP13.4□□□□□ -0.26
USP6NL-206ENST00000609853 FAM114A1Q8IWE2 563 aa13.4□□□□□ -0.26
USP6NL-206ENST00000609853 MTMR14Q8NCE2 650 aa13.4□□□□□ -0.26
USP6NL-206ENST00000609853 GMLQ99445 158 aa13.4□□□□□ -0.26
USP6NL-206ENST00000609853 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
USP6NL-206ENST00000609853 KIF13BQ9NQT8 1826 aa13.4□□□□□ -0.26
USP6NL-206ENST00000609853 KDM3AQ9Y4C1 1321 aa13.4□□□□□ -0.26
USP6NL-206ENST00000609853 TEX33O43247 280 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 EDIL3O43854 480 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 NDUFB10O96000 172 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 BMP3P12645 472 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 CCNE1P24864 410 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 ASIC1P78348 528 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 PDE4DQ08499 809 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 GRB10Q13322 594 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 DLGAP5Q15398 846 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 FOXR2Q6PJQ5 311 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 SLFN12Q8IYM2 578 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 LARGE2Q8N3Y3 721 aa13.39□□□□□ -0.27
USP6NL-206ENST00000609853 AGBL3Q8NEM8 1001 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms