RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 KRIT1O00522 736 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 LRCH2Q5VUJ6 765 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 SLC35F6Q8N357 371 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 KANSL2Q9H9L4 492 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 NR2F2P24468 414 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 IRX5P78411 483 aaPredicted RBP15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 GRAPQ13588 217 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 DCAF15Q66K64 600 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 CLEC4GQ6UXB4 293 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 CROCCP2Q86T23 111 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 GRAPLQ8TC17 118 aaPredicted RBP15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 ALDH3A1P30838 453 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 PPM1KQ8N3J5 372 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 GPR101Q96P66 508 aaPredicted RBP15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 CSADQ9Y600 493 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 SETBP1Q9Y6X0 1596 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 N4BP1O75113 896 aaKnown RBP15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 GAS8O95995 478 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 RASA3Q14644 834 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 MLXIPQ9HAP2 919 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 USP31Q70CQ4 1352 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 GCFC2P16383 781 aaKnown RBP15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 NEDD4P46934 1319 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 NOD1Q9Y239 953 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 DLATP10515 647 aaKnown RBP15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 ATP1A3P13637 1013 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 SNX16P57768 344 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 SMCR8Q8TEV9 937 aaPredicted RBP15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 STAG1Q8WVM7 1258 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 RNF34Q969K3 372 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 BRIP1Q9BX63 1249 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 CDC23Q9UJX2 597 aa15.66■□□□□ 0.1
PCDHB16-201ENST00000609684 ENC1O14682 589 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 PRPF6O94906 941 aaKnown RBP15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 RASSF4Q9H2L5 321 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 C1orf112Q9NSG2 853 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 hCG_1984214I3L0E3 225 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 RASSF7Q02833 373 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 TAOK1Q7L7X3 1001 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 ZNF713Q8N859 430 aaPredicted RBP15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 PAGE5Q96GU1 130 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 NRKQ7Z2Y5 1582 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 RPAP1Q9BWH6 1393 aaPredicted RBP15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 DAPK3O43293 454 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 CFAP157Q5JU67 520 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 CYB5R4Q7L1T6 521 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 VSTM4Q8IW00 320 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 MAIP1Q8WWC4 291 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 STK17AQ9UEE5 414 aa15.65■□□□□ 0.1
PCDHB16-201ENST00000609684 CDK8P49336 464 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 DENND2CQ68D51 928 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 CC2D2BQ6DHV5 1058 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 ANKRD35Q8N283 1001 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 HINFPQ9BQA5 517 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 NDC80O14777 642 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 PLCG1P19174 1290 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 CTNNA1P35221 906 aaKnown RBP15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 METTL13Q8N6R0 699 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 PPM1EQ8WY54 764 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 RWDD2AQ9UIY3 292 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 HGSO14964 777 aaPredicted RBP15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 MYL1P05976 194 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 PRDX5P30044 214 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 GTF2A1P52655 376 aaPredicted RBP15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 DMP1Q13316 513 aaPredicted RBP15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 TAF12Q16514 161 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 ST7Q9NRC1 585 aa15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 FEZ2Q9UHY8 353 aaPredicted RBP15.64■□□□□ 0.09
PCDHB16-201ENST00000609684 FKBP3Q00688 224 aaKnown RBP15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 EHHADHQ08426 723 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 MAN2A1Q16706 1144 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 DGKHQ86XP1 1220 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 CYP2D6P10635 497 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 BMP3P12645 472 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 TMTC3Q6ZXV5 915 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 SRGAP1Q7Z6B7 1085 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 ADAT2Q7Z6V5 191 aaKnown RBP15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 CABS1Q96KC9 395 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 RIC8AQ9NPQ8 531 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 TRPC6Q9Y210 931 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 CDHR2Q9BYE9 1310 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 INPP5BP32019 993 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 PPM1FP49593 454 aaPredicted RBP15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 PDE6CP51160 858 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 UBE2SQ16763 222 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 MB21D2Q8IYB1 491 aaPredicted RBP15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 RABGGTAQ92696 567 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 ZNF577Q9BSK1 485 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 ISCA1Q9BUE6 129 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 CEP152O94986 1710 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 KRT15P19012 456 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 CEP85LQ5SZL2 805 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 ZBTB8OSQ8IWT0 167 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 RETREG2Q8NC44 543 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 DPH5Q9H2P9 285 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 SUGCTQ9HAC7 445 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 PARP2Q9UGN5 583 aa15.63■□□□□ 0.09
PCDHB16-201ENST00000609684 RFX7Q2KHR2 1363 aa15.62■□□□□ 0.09
PCDHB16-201ENST00000609684 FAM184BQ9ULE4 1060 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms