RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 BEX3Q00994 111 aa16.84■□□□□ 0.29
HDDC2-204ENST00000608295 TROAPQ12815 778 aa16.84■□□□□ 0.29
HDDC2-204ENST00000608295 RNF180Q86T96 592 aa16.84■□□□□ 0.29
HDDC2-204ENST00000608295 PRDM5Q9NQX1 630 aaPredicted RBP16.84■□□□□ 0.29
HDDC2-204ENST00000608295 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
HDDC2-204ENST00000608295 hCG_1642624A0A1W2PR95 340 aa16.83■□□□□ 0.28
HDDC2-204ENST00000608295 CAPN2P17655 700 aa16.83■□□□□ 0.28
HDDC2-204ENST00000608295 TRIM60Q495X7 471 aa16.83■□□□□ 0.28
HDDC2-204ENST00000608295 CCDC82Q8N4S0 544 aa16.83■□□□□ 0.28
HDDC2-204ENST00000608295 NEK1Q96PY6 1258 aa16.83■□□□□ 0.28
HDDC2-204ENST00000608295 AMNQ9BXJ7 453 aa16.83■□□□□ 0.28
HDDC2-204ENST00000608295 COL20A1Q9P218 1284 aa16.83■□□□□ 0.28
HDDC2-204ENST00000608295 ADD3Q9UEY8 706 aaKnown RBP16.83■□□□□ 0.28
HDDC2-204ENST00000608295 A0A1W2PQ45 241 aaPredicted RBP16.82■□□□□ 0.28
HDDC2-204ENST00000608295 A0A1W2PQY0 241 aa16.82■□□□□ 0.28
HDDC2-204ENST00000608295 ZBTB5O15062 677 aa16.82■□□□□ 0.28
HDDC2-204ENST00000608295 DDAH1O94760 285 aa16.82■□□□□ 0.28
HDDC2-204ENST00000608295 EIF2AK2P19525 551 aaKnown RBP16.82■□□□□ 0.28
HDDC2-204ENST00000608295 HOXA13P31271 388 aaPredicted RBP16.82■□□□□ 0.28
HDDC2-204ENST00000608295 TNFAIP2Q03169 654 aa16.82■□□□□ 0.28
HDDC2-204ENST00000608295 PDE4DQ08499 809 aa16.82■□□□□ 0.28
HDDC2-204ENST00000608295 TLK2Q86UE8 772 aa16.82■□□□□ 0.28
HDDC2-204ENST00000608295 TMEM87BQ96K49 555 aa16.82■□□□□ 0.28
HDDC2-204ENST00000608295 TAAR1Q96RJ0 339 aa16.82■□□□□ 0.28
HDDC2-204ENST00000608295 PCDHA1Q9Y5I3 950 aa16.82■□□□□ 0.28
HDDC2-204ENST00000608295 LTBP2Q14767 1821 aa16.82■□□□□ 0.28
HDDC2-204ENST00000608295 DUSP11O75319 330 aaKnown RBP16.81■□□□□ 0.28
HDDC2-204ENST00000608295 SMPD1P17405 629 aa16.81■□□□□ 0.28
HDDC2-204ENST00000608295 SLC39A5Q6ZMH5 540 aa16.81■□□□□ 0.28
HDDC2-204ENST00000608295 ZFP91Q96JP5 570 aaPredicted RBP16.81■□□□□ 0.28
HDDC2-204ENST00000608295 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
HDDC2-204ENST00000608295 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
HDDC2-204ENST00000608295 PNMA2Q9UL42 364 aa16.81■□□□□ 0.28
HDDC2-204ENST00000608295 MRPL11Q9Y3B7 192 aaKnown RBP16.81■□□□□ 0.28
HDDC2-204ENST00000608295 SLC12A7Q9Y666 1083 aa16.81■□□□□ 0.28
HDDC2-204ENST00000608295 TRIOBPQ9H2D6 2365 aa16.81■□□□□ 0.28
HDDC2-204ENST00000608295 OPLAHO14841 1288 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 DYNC1LI2O43237 492 aaPredicted RBP16.8■□□□□ 0.28
HDDC2-204ENST00000608295 PQBP1O60828 265 aaKnown RBP16.8■□□□□ 0.28
HDDC2-204ENST00000608295 ACLYP53396 1101 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 FGD1P98174 961 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 MDM2Q00987 491 aaPredicted RBP16.8■□□□□ 0.28
HDDC2-204ENST00000608295 KCNA10Q16322 511 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 GNASQ5JWF2 1037 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 TAPT1Q6NXT6 567 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 SYTL5Q8TDW5 730 aaPredicted RBP16.8■□□□□ 0.28
HDDC2-204ENST00000608295 VTI1AQ96AJ9 217 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 SPC25Q9HBM1 224 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 STARD7Q9NQZ5 370 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 PHF24Q9UPV7 400 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 KIAA1217Q5T5P2 1943 aa16.8■□□□□ 0.28
HDDC2-204ENST00000608295 DNAH12Q6ZR08 3092 aa16.79■□□□□ 0.28
HDDC2-204ENST00000608295 KIF5BP33176 963 aa16.79■□□□□ 0.28
HDDC2-204ENST00000608295 MAGEA10P43363 369 aaPredicted RBP16.79■□□□□ 0.28
HDDC2-204ENST00000608295 HABP4Q5JVS0 413 aaKnown RBP16.79■□□□□ 0.28
HDDC2-204ENST00000608295 FCHSD1Q86WN1 690 aa16.79■□□□□ 0.28
HDDC2-204ENST00000608295 MCF2L2Q86YR7 1114 aa16.79■□□□□ 0.28
HDDC2-204ENST00000608295 COPS5Q92905 334 aa16.79■□□□□ 0.28
HDDC2-204ENST00000608295 MTMR8Q96EF0 704 aa16.79■□□□□ 0.28
HDDC2-204ENST00000608295 AP5M1Q9H0R1 490 aa16.79■□□□□ 0.28
HDDC2-204ENST00000608295 RIOX1Q9H6W3 641 aa16.79■□□□□ 0.28
HDDC2-204ENST00000608295 BRPF3Q9ULD4 1205 aa16.79■□□□□ 0.28
HDDC2-204ENST00000608295 SNX14Q9Y5W7 946 aa16.79■□□□□ 0.28
HDDC2-204ENST00000608295 KLF18A0A0U1RQI7 1052 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 SORBS3O60504 671 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 REC8O95072 547 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 ASGR1P07306 291 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 MYCLP12524 364 aaPredicted RBP16.78■□□□□ 0.28
HDDC2-204ENST00000608295 HSPA4P34932 840 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 ARHGEF16Q5VV41 709 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 APOA5Q6Q788 366 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 SEPT14Q6ZU15 432 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
HDDC2-204ENST00000608295 PPP1R13LQ8WUF5 828 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 RRP36Q96EU6 259 aaKnown RBP16.78■□□□□ 0.28
HDDC2-204ENST00000608295 RMDN3Q96TC7 470 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 WDR11Q9BZH6 1224 aa16.78■□□□□ 0.28
HDDC2-204ENST00000608295 SEC63Q9UGP8 760 aaKnown RBP16.78■□□□□ 0.28
HDDC2-204ENST00000608295 PNMA6FA0A0J9YX94 578 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 LIFRP42702 1097 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 GJA9P57773 515 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 KRT32Q14532 448 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 PPP2R5BQ15173 497 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 CXCL17Q6UXB2 119 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 SYNE3Q6ZMZ3 975 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 DHX32Q7L7V1 743 aaKnown RBP16.77■□□□□ 0.28
HDDC2-204ENST00000608295 SH3RF1Q7Z6J0 888 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 KLHDC9Q8NEP7 349 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 DNERQ8NFT8 737 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 OR6J1Q8NGC5 347 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 IL31RAQ8NI17 732 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 MORC4Q8TE76 937 aa16.77■□□□□ 0.28
HDDC2-204ENST00000608295 GPKOWQ92917 476 aaPredicted RBP eCLIP16.77■□□□□ 0.28
HDDC2-204ENST00000608295 MPHOSPH6Q99547 160 aaKnown RBP16.77■□□□□ 0.28
HDDC2-204ENST00000608295 UPF3AQ9H1J1 476 aaKnown RBP16.77■□□□□ 0.28
HDDC2-204ENST00000608295 GNEQ9Y223 722 aaKnown RBP16.77■□□□□ 0.28
HDDC2-204ENST00000608295 DOCK5Q9H7D0 1870 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 GOLGA8AA7E2F4 631 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 GOLGA8BA8MQT2 603 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms