RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 FRMPD2Q68DX3 1309 aaPredicted RBP11.98□□□□□ -0.49
LINC01954-201ENST00000607419 USP17L15C9J2P7 530 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 USP17L13C9JLJ4 530 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 USP17L11C9JVI0 530 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 USP17L18D6R9N7 530 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 USP17L22D6RA61 530 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 USP17L17D6RBQ6 530 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 USP17L19D6RCP7 530 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 USP17L20D6RJB6 530 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 CPLX1O14810 134 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 GOLGA8HP0CJ92 632 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 CDC27P30260 824 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 MAPK4P31152 587 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 ADD1P35611 737 aaKnown RBP11.98□□□□□ -0.49
LINC01954-201ENST00000607419 RGS2P41220 211 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 IRX3P78415 501 aaPredicted RBP11.98□□□□□ -0.49
LINC01954-201ENST00000607419 USP17L24Q0WX57 530 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 MAP2K5Q13163 448 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 TJAP1Q5JTD0 557 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 BTNL9Q6UXG8 535 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 TMTC3Q6ZXV5 915 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 RASGRP2Q7LDG7 609 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 FAM160B2Q86V87 743 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 CCDC83Q8IWF9 413 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 STAG2Q8N3U4 1231 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 SOCS4Q8WXH5 440 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
LINC01954-201ENST00000607419 NCOA5Q9HCD5 579 aaKnown RBP11.98□□□□□ -0.49
LINC01954-201ENST00000607419 GPCPD1Q9NPB8 672 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 PDLIM7Q9NR12 457 aa11.98□□□□□ -0.49
LINC01954-201ENST00000607419 DDX20Q9UHI6 824 aaKnown RBP11.98□□□□□ -0.49
LINC01954-201ENST00000607419 TMEM232C9JQI7 657 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 CDKL5O76039 1030 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 IFNAR1P17181 557 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 CNGA1P29973 690 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 PLA2G5P39877 138 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 STAT2P52630 851 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 CUL4AQ13619 759 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 NTRK3Q16288 839 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 TRIM60Q495X7 471 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 CATSPERGQ6ZRH7 1159 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 TRMT44Q8IYL2 757 aaKnown RBP11.97□□□□□ -0.49
LINC01954-201ENST00000607419 APBA2Q99767 749 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 LLPHQ9BRT6 129 aaKnown RBP11.97□□□□□ -0.49
LINC01954-201ENST00000607419 SPZ1Q9BXG8 430 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 TANGO6Q9C0B7 1094 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 PRDM5Q9NQX1 630 aaPredicted RBP11.97□□□□□ -0.49
LINC01954-201ENST00000607419 BTBD7Q9P203 1132 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 CHD7Q9P2D1 2997 aa11.97□□□□□ -0.49
LINC01954-201ENST00000607419 DNM1LO00429 736 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 PLEKHA8P1O95397 391 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 PTPREP23469 700 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 ST3GAL1Q11201 340 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.49
LINC01954-201ENST00000607419 COG2Q14746 738 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 PRAMEF19Q5SWL8 479 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 SYDE2Q5VT97 1194 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 SRBD1Q8N5C6 995 aaKnown RBP11.96□□□□□ -0.49
LINC01954-201ENST00000607419 PRPF38AQ8NAV1 312 aaKnown RBP11.96□□□□□ -0.49
LINC01954-201ENST00000607419 PPM1EQ8WY54 764 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 INTS4Q96HW7 963 aaKnown RBP11.96□□□□□ -0.49
LINC01954-201ENST00000607419 SLF1Q9BQI6 1058 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 UBA5Q9GZZ9 404 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 RIOX1Q9H6W3 641 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 HOXC10Q9NYD6 342 aa11.96□□□□□ -0.49
LINC01954-201ENST00000607419 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.96□□□□□ -0.49
LINC01954-201ENST00000607419 CNTNAP5Q8WYK1 1306 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 FLOT1O75955 427 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 FDX1P10109 184 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 CYBAP13498 195 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 SLC16A2P36021 539 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 SSRP1Q08945 709 aaKnown RBP11.95□□□□□ -0.5
LINC01954-201ENST00000607419 FUT2Q10981 343 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 SNX17Q15036 470 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 TRIM22Q8IYM9 498 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 ADGRF4Q8IZF3 695 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 CMTR1Q8N1G2 835 aaKnown RBP11.95□□□□□ -0.5
LINC01954-201ENST00000607419 FERMT2Q96AC1 680 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 RNF26Q9BY78 433 aaPredicted RBP11.95□□□□□ -0.5
LINC01954-201ENST00000607419 FBXO28Q9NVF7 368 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 PRKAG2Q9UGJ0 569 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 PPP1R9AQ9ULJ8 1098 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 PRR12Q9ULL5 1215 aa11.95□□□□□ -0.5
LINC01954-201ENST00000607419 STK36Q9NRP7 1315 aa11.94□□□□□ -0.5
LINC01954-201ENST00000607419 TMEM265A0A087WTH1 108 aa11.94□□□□□ -0.5
LINC01954-201ENST00000607419 PRPF3O43395 683 aaKnown RBP11.94□□□□□ -0.5
LINC01954-201ENST00000607419 CYTH3O43739 400 aa11.94□□□□□ -0.5
LINC01954-201ENST00000607419 CTDNEP1O95476 244 aa11.94□□□□□ -0.5
LINC01954-201ENST00000607419 HSP90AA1P07900 732 aaKnown RBP11.94□□□□□ -0.5
LINC01954-201ENST00000607419 ADCYAP1R1P41586 468 aa11.94□□□□□ -0.5
LINC01954-201ENST00000607419 HMGN5P82970 282 aaKnown RBP11.94□□□□□ -0.5
LINC01954-201ENST00000607419 AKAP17AQ02040 695 aaKnown RBP11.94□□□□□ -0.5
LINC01954-201ENST00000607419 CCDC82Q8N4S0 544 aa11.94□□□□□ -0.5
LINC01954-201ENST00000607419 NSUN7Q8NE18 718 aaKnown RBP11.94□□□□□ -0.5
LINC01954-201ENST00000607419 SMARCC2Q8TAQ2 1214 aa11.94□□□□□ -0.5
LINC01954-201ENST00000607419 RRP36Q96EU6 259 aaKnown RBP11.94□□□□□ -0.5
LINC01954-201ENST00000607419 CPVLQ9H3G5 476 aa11.94□□□□□ -0.5
LINC01954-201ENST00000607419 JMJD4Q9H9V9 463 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms